Query= MSMg01no155_p22.b1 MSMg01no155_p22.b1 CHROMAT_FILE:
MSMg01no155_p22.b1 PHD_FILE: MSMg01no155_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:01 2005
(318 letters)
>mm_chr12_94016709_94017426
Length = 718
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Plus
Query: 1 tgctgaaagtgtagtgctgtgtctcttatcaagcataaaccactgaccttcctctaggaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgaaagtgtagtgctgtgtctcctatcaagcataaaccactgaccttcctctaggaa 260
Query: 61 gaaaaccgaaatgtttaccgaaaagatgggtacattagaacaattggacctaccacaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaccgaaatgtttaccgaaaagatgggtacattagaacaattggacctaccacaggc 320
Query: 121 aaccaaacagtgtgttttgtaaacgtgccctttttcttgatgataaattctataaaactg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aaccaaacagtgtgttttgtaaacgtaccctttttcttgatgataaattctataaaactg 380
Query: 181 ctctcacagctatcaactttactgctgagacatggactaacattagtggatgagattggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctcacagctatcaactttactgctgagacatggactaacattagtggatgagattggt 440
Query: 241 gaaaggtgttctggggactgaaaatacacagaattgaaaacagtgttgtgtaatcatgtg 300
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagaggtgttttggggactgaaaatacacagaattgaaaacagtgttgtgtaatcatgtg 500
Query: 301 tggtatgcaattttattg 318
||||||||||||||||||
Sbjct: 501 tggtatgcaattttattg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_p22.g1 MSMg01no155_p22.g1 CHROMAT_FILE:
MSMg01no155_p22.g1 PHD_FILE: MSMg01no155_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:01 2005
(558 letters)
>mm_chr12_94114747_94115704
Length = 958
Score = 996 bits (515), Expect = 0.0
Identities = 547/559 (97%), Gaps = 4/559 (0%)
Strand = Plus / Minus
Query: 1 tcccattgaattatctttccttcatctataggtatggtcagtttgctgggcctgttcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tcccattgaattatctttccttcatctataggtatggtcagtttgctgggcctgttcaga 698
Query: 61 gaattttgacggatagaaaagaaacaggcatattttagtcagatggcattagagagaaga 120
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 697 gaattttggtggatagaaaagaaataggcatattttagtcagatggcattagagagaaga 638
Query: 121 gtagagtgaagccctcaaggctttgtgaaagctgcctgttgtcagctgctgcttcagcct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 637 gtagagtgaagccctcaaggctttgtgtaagctgcctgttgtcagctgctgcttcagcct 578
Query: 181 taagcaaaacaatgatccaatcagatctgcaatttacatttggcttactgagagtgatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 taagcaaaacaatgatccaatcagatctgcaatttacatttggcttactgagagtgatgt 518
Query: 241 aaatagtctcttacatataaggaagggaacaactgggagaaaaattaaagaaaccaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aaatagtctcttacatataaggaagggaacaactgggagaaaaattaaagaaaccaaaca 458
Query: 301 cttgagtaatgaggtcatttgatcactggcagaaggaacttaaaggaggaaatgattaca 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 457 cttgagtaatgaggtcatttgatcactggcagaaggaacgtaaaggaggaaatgattaca 398
Query: 361 aatgctacaaacaaatatgaatagttacaaatgcaaatatcagaaagagaaaatatatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aatgctacaaacaaatatgaatagttacaaatgcaaatatcagaaagagaaaatatatac 338
Query: 421 tggaatctgggaattttgacacagaaacaacaaagcaggtaagatattgctctagcctct 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 337 tggaatctgggaattttgacacagaaacaacaaaacaggtaagatattgctctagtctct 278
Query: 481 ggttaatcagcaactgtttaattttacatagattaaatctttaactgcccaacc--catg 538
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 277 ggttaatcagcaactgtttaattttacattgattaaatctttaactgcccaaccaaca-- 220
Query: 539 ctataaagaaagtgtgact 557
|||||||||||||||||||
Sbjct: 219 ctataaagaaagtgtgact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
