Query= MSMg01no156_c24.b1 MSMg01no156_c24.b1 CHROMAT_FILE:
MSMg01no156_c24.b1 PHD_FILE: MSMg01no156_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:15 2005
(318 letters)
>mm_chr12_118280173_118280888
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaattacttttttttttcctcttaaaaacttcctcttataatcaagcacaatt 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaattacttttttttt-cctcttaaaaacttcctcttataatcaagcacaatt 263
Query: 65 atctagactttgatatcagccatcactatagaccctgaagccagtcagagacaaccagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctagactttgatatcagccatcactatagaccctgaagccagtcagagacaaccagga 323
Query: 125 atttgaccacagacagggttcctaaagagtcactgtctagacttggaggaaaagacaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atttgaccacagacagggttcctaaagagtcactgtctagacttggaggaaaagacaacc 383
Query: 185 tctctgggtcaccccgacatttctcatctatgtctcttggaggacaagttccaaaggtga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctctgggtcaccccgacatttctcatctatgtctcttggaggacaagttccaaaggtga 443
Query: 245 ctctgagtaagagacagctgtagccaaagttggagaggtggcctaaagaggtcctcagat 304
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 444 ctctgagtaagagacagttgtagccaaaattggagaggtggcctaa-gaggtcctcagat 502
Query: 305 gatagcacagcct 317
|||||||||||||
Sbjct: 503 gatagcacagcct 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_c24.g1 MSMg01no156_c24.g1 CHROMAT_FILE:
MSMg01no156_c24.g1 PHD_FILE: MSMg01no156_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:15 2005
(278 letters)
>mm_chr12_118395059_118395734
Length = 676
Score = 526 bits (272), Expect = e-154
Identities = 276/278 (99%), Gaps = 2/278 (0%)
Strand = Plus / Minus
Query: 1 taataaatgagagaagtcaggcggaaataatcatgtattaattctctgcattacaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 taataaatgagagaagtcaggcggaaataatcatgtattaattctctgcattacaaaatc 417
Query: 61 ttttcagaagctattatcagagcaagaggcattgcggtctgaattcagggtgggagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttttcagaagctattatcagagcaagaggcattgcggtctgaattcagggtgggagaagg 357
Query: 121 cctttgtgcggctgaaagctattgttcccctctacagatgaaattgtacttgcaaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cctttgtgcggctgaaagctattgttcccctctacagatgaaattgtacttgcaaatctg 297
Query: 181 ccattcaaatagccacaaaaaaaaaagcttatatgagcagaagaatctcccaagaaataa 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ccattcaaatagccac--aaaaaaaagcttatatgagcagaagaatctcccaagaaataa 239
Query: 241 ttatttttaagcataaactttaatgaaaacaagttatg 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttatttttaagcataaactttaatgaaaacaagttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 676
Length adjustment: 9
Effective length of query: 269
Effective length of database: 667
Effective search space: 179423
Effective search space used: 179423
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
