Query= MSMg01no156_o19.b1 MSMg01no156_o19.b1 CHROMAT_FILE:
MSMg01no156_o19.b1 PHD_FILE: MSMg01no156_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:10 2005
(181 letters)
>mm_chr12_96453910_96454490
Length = 581
Score = 311 bits (161), Expect = 1e-89
Identities = 171/175 (97%)
Strand = Plus / Minus
Query: 4 ggaattcatatctgaaggctgaagctttcataaatatcttacactggggttatattgaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggaattcatatctgaaggctgaagctttcataaatatcttacactggggttatattgaat 319
Query: 64 atgtgagcaccaaagatcatttaatagggtaaaatattaaataagtgtattgtggtcatt 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 318 atgtgaggaccaaagatcatttaatagggtaaaatattaaataagtgtattgtggtcgtt 259
Query: 124 aggaatttgaaggtaggtattttgaatatattattattggaaatgncntatttac 178
||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 258 aggaatttgaaggtaggtattttgaatatattattattggaaatgtcttatttac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no156_o19.g1 MSMg01no156_o19.g1 CHROMAT_FILE:
MSMg01no156_o19.g1 PHD_FILE: MSMg01no156_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:10 2005
(285 letters)
>mm_chr12_96272384_96273068
Length = 685
Score = 435 bits (225), Expect = e-126
Identities = 267/281 (95%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 5 aagctgctaaacaagattacttttgtttcacatggcttaccttgatctatgggtttaaga 64
||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 206 aagctgctaaagaagattacttttgtttcacacgacttaccttgatctatgggtttaaga 265
Query: 65 cttagctcagtggtaaagtactttcctaacaaaaacaaggatccagttttgatacccaga 124
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 266 cttagctcagtggtaaagtactttcctaacaaaagcaaggatccagatttgatacccaaa 325
Query: 125 acttgaaaaaaaaaaaagtaacttacatataattaaatgaacttgtataaaaatctattc 184
||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 acttg-aaaaaaaataagtaatttacatataattaaatgcacttgtataaaaatctattc 384
Query: 185 atactccacaaccaccaccaaaatcactacttctccaaaacagtgtaactctttccaata 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atactccacatccaccaccaaaatcactacttctccaaaacagtgtaactctttccaata 444
Query: 245 taggattagttatttccctttattgtcacaagagcaagctc 285
|||||||| ||||||| |||||||||||||| |||||||||
Sbjct: 445 taggattatttatttctctttattgtcacaaaagcaagctc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
