Query= MSMg01no157_f08.b1 MSMg01no157_f08.b1 CHROMAT_FILE:
MSMg01no157_f08.b1 PHD_FILE: MSMg01no157_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:39 2005
(318 letters)
>mm_chr12_47684193_47684910
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 5 gaattcacttttctttgtcagagaagcgacattaagaaagatgtctgagcattgaaacct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcacttttctttgtcagagaagcgacattaagaaagatgtctgagcattgaaacct 459
Query: 65 cctttgagcaagttatatgtattatttggctaaattgcatgtatcagggaagaagattgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cctttgagcaagttatatgtattatttggctaaattgcatgtatcagggaagaagattgc 399
Query: 125 taaggaggagggtgctcactgttcattcttcctgtaacaatagactcaaatgaataattg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taaggaggagggtgctcactgttcattcttcctgtaacaatagactcaaatgaataattg 339
Query: 185 tgggatagtaggagataagggctttggtttatcagagaaatgctcttaattggacttgct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgggatagtaggagataagggctttggtttatcagagaaatgctcttaattggacttgct 279
Query: 245 ataccagtggatgcctcatctgaatagaccatctattgttaataaatgttactgggctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ataccagtggatgcctcatctgaatagaccatctattgttaataaatgttactgggctat 219
Query: 305 ttttcatattatat 318
||||||||||||||
Sbjct: 218 ttttcatattatat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_f08.g1 MSMg01no157_f08.g1 CHROMAT_FILE:
MSMg01no157_f08.g1 PHD_FILE: MSMg01no157_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:39 2005
(578 letters)
>mm_chr12_47602096_47603073
Length = 978
Score = 1042 bits (539), Expect = 0.0
Identities = 566/575 (98%), Gaps = 1/575 (0%)
Strand = Plus / Plus
Query: 4 atcttcagtcgctttacaatcacagatctccatatattaagaaccatcataagagcatat 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 atcttcagtcgctttacaatcacacatctccatatattaagaaccatcataagagcatat 263
Query: 64 gcagaatggaagggatctgtaactagaaaaaaaaaaagttccctttcccaaggatcattt 123
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 264 gcagaatggaagggatctgtaactagaaaaaaaaaaggttccctttccaaaggatcattt 323
Query: 124 gactgagaaatgcttaaaatgtccattctcagcatcatggcccaattccttgctaatgca 183
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 gactgaaaaatgcttaaaatgtccattctcagcatcatggcccagttccttgctaatgca 383
Query: 184 ggaggcattccgtgctggtgggtgttgggaactagattgtttctctaaaatccatgtctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaggcattccgtgctggtgggtgttgggaactagattgtttctctaaaatccatgtctg 443
Query: 244 gggtctttgcgcctatgcccaggtaattctggatgccattctgtttacagatagagttgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggtctttgcgcctatgcccaggtaattctggatgccattctgtttacagatagagttgc 503
Query: 304 acagaagtaacgaagaaagcagtccttaggggaggactctagtgcctggtgtccttatag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acagaagtaacgaagaaagcagtccttaggggaggactctagtgcctggtgtccttatag 563
Query: 364 caagagacgtttagcagatacatttgcagaagggaatgctttgtaatgatgtgtgggggg 423
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 564 caagagacgtttagcagatacatttgcagaagggaatgctttgtaatgacgtatgggggg 623
Query: 424 gaggaggaagccaccatatgccaaagacagttgatttgggcaaaactgatcagcagatgc 483
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 -agggggaagccaccatatgccaaagacagttgatttgggcaaaactgatcagcagatgc 682
Query: 484 acagacctgagctcagagcactagcttctagaacttctgggaatttctgttgttctcatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acagacctgagctcagagcactagcttctagaacttctgggaatttctgttgttctcatc 742
Query: 544 tccccagtgtagtcacttgccattgcagccttagc 578
|||||||||||||||||||||||||||||||||||
Sbjct: 743 tccccagtgtagtcacttgccattgcagccttagc 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
