Query= MSMg01no159_b15.b1 MSMg01no159_b15.b1 CHROMAT_FILE:
MSMg01no159_b15.b1 PHD_FILE: MSMg01no159_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:45 2005
(599 letters)
>mm_chr12_75400933_75401931
Length = 999
Score = 928 bits (480), Expect = 0.0
Identities = 508/520 (97%), Gaps = 6/520 (1%)
Strand = Plus / Minus
Query: 5 gaattctagaaacaagaaaactaccttacctcacaagcactcagtgactaagtctggtca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattctagaaacaagaaaactaccttacctcacaagcactcagtgactaagtctggtca 455
Query: 65 cttttttaattagaactgtgttcaatcaataatgttaccatgaatggattctagtttggt 124
||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cttttttaacaagaattgtgttcaatcaataatgttaccatgaatggattctagtttggt 395
Query: 125 aaactctggaactcttctggctgaggaactcggccagaatttttaagctattatcctcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaactctggaactcttctggctgaggaactcggccagaatttttaagctattatcctcct 335
Query: 185 atgaccatctctgggcagatcaatgtccatgcaagagagaatggacagaagacaactggg 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atgactatctctgggcagatcaatgtccatgcaagagagaatggacagaagacaactggg 275
Query: 245 gattagggacaaactgcaagtcagagaggcagctcatgggacagagagaagatagcttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gattagggacaaactgcaagtcagagaggcagctcatgggacagagagaagatagcttca 215
Query: 305 atagcaggtgtttttttaaaaaaaaaaaaaatccccaaatccattcaaatcaaaagacac 364
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gtagcaggtgattt-----aaaaaaaaaaaatccccaaatccattcaaatcaaaagacac 160
Query: 365 atgaacaaaagctgcctctctgaccttattcatgccagacccagctttaggccatgatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgaacaaaagctgcctctctgaccttattcatgccagacccagctttaggccatgatct 100
Query: 425 acccattatgattgtcctttacagctttccttgacatcaatattaacctgattcacccta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 acccattatgattgtcctttacagctttccttgacatcaatattaacctgattcacccta 40
Query: 485 taaaagaacaaaaaactagaagagatggaggggttgttga 524
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 39 taaaagaacaaaaaactagaa-agatggaggggttgttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_b15.g1 MSMg01no159_b15.g1 CHROMAT_FILE:
MSMg01no159_b15.g1 PHD_FILE: MSMg01no159_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:45 2005
(571 letters)
>mm_chr12_75354376_75355346
Length = 971
Score = 1050 bits (543), Expect = 0.0
Identities = 564/571 (98%)
Strand = Plus / Plus
Query: 1 tccactaaacccatctggtcctgggcttttgttagttgggagactattaatggctgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccactaaacccatctggtcctgggcttttgttagttgggagactattaatggctgcttc 260
Query: 61 tatttctttagaggttatgggaaaatacaatcatttgtagttgacacaggagagtcttgt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tatttctttagaggttatgggaaaatataatcatttgtagttgacacaggagagtcttgt 320
Query: 121 ccattgtgttcagaattcctgataaacagtttatatttgatcacagaacagtcccaagat 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 ccattgtgttcagaattcctgataaacagtttatatttgttcacagaacagtcccaagat 380
Query: 181 atctatgtttcaggtgcctaaaaacaattttcctgataattatcttccagccttcccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 atctatgtttcaggtgcctaaaaacaattttcctgataattatcttccagccttctcatg 440
Query: 241 ccttatcttaataataagcatcctttgatatactgcacctagataattctctgttttcta 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 ccttatcttaataataagcatcctttgatatactgcacttagataattctctgttttcta 500
Query: 301 gacaaaaatctgactgacacagtaacccacaatcttaattgcaatgctgccttcacaaaa 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 gacaaaaatctgactgacacagtaacccacaatcttaattggaatgctgccttcacaaaa 560
Query: 361 agcaagcattagaattagcttagaagtcagggccaattcatgaagaaggtaggattagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 agcaagcattagaattagcttagaagtcagggccaattcatgaagaaggtaggatcagaa 620
Query: 421 gacagaaaaatggagtgtggtaatacatgtcccaagagggtaaaactgccatattgtatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacagaaaaatggagtgtggtaatacatgtcccaagagggtaaaactgccatattgtatc 680
Query: 481 ttagaaggggagagacatgcccacccaacatgtggctctagggaaagagatcctgaaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttagaaggggagagacatgcccacccaacatgtggctctagggaaagagatcctgaaaac 740
Query: 541 tccagaatttagaagtgtgtgctttgatgtg 571
|||||||||||||||||||||||||| ||||
Sbjct: 741 tccagaatttagaagtgtgtgctttggtgtg 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
