Query= MSMg01no164_p14.b1 MSMg01no164_p14.b1 CHROMAT_FILE:
MSMg01no164_p14.b1 PHD_FILE: MSMg01no164_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:58 2005
(656 letters)
>mm_chr12_48030759_48031815
Length = 1057
Score = 458 bits (237), Expect = e-133
Identities = 330/375 (88%), Gaps = 31/375 (8%)
Strand = Plus / Minus
Query: 288 ttgggatagaggctacactgatatacaatatcatgtctcaatcaacaacaataacaacaa 347
|||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 1057 ttgggatagaggctacactgatatacaaaaccatgtctcaat---------------caa 1013
Query: 348 caacaacaacaacaacaacaacaaccacacacaaatctagggccaggcggggtggtggac 407
||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 1012 caacaacaacaacaacaacaaca---acagacaaatctagggccaggcatggtggtggac 956
Query: 408 acctttaatcctagcacttgggaggcagaggcaggcagatttctgagttcgaggccagcc 467
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 955 acctttaatcctagcacttgggaggcag----aggcagatttctgagttcgaggccatcc 900
Query: 468 tggtctacaaaaacaaacaaacaaaaacaaa-aaac-aaaac--aaaacaaaa-agacca 522
|||||||||||||||||||||| ||||||| |||| ||||| ||||||||| | ||||
Sbjct: 899 tggtctacaaaaacaaacaaac--aaacaaacaaacaaaaacaaaaaacaaaaca-acca 843
Query: 523 atctaacctcaggggg-gaaaatcaaattgtaaagacagattgtgggtttttaaaaccca 581
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 atctaacctcagggggaaaaaatcaaattgtaaagacagattgtgggtttttaaaaccca 783
Query: 582 tagaacagtatctgaatgtgttcctctcatggtttttatctgctagaacggctagatggg 641
|||||||||||| ||||||||||| |||||| |||||||||| |||||| | || |||||
Sbjct: 782 tagaacagtatccgaatgtgttcccctcatgatttttatctgttagaacagttaaatggg 723
Query: 642 ttcatgacatataat 656
|||||||||||||||
Sbjct: 722 ttcatgacatataat 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space: 676362
Effective search space used: 676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_p14.g1 MSMg01no164_p14.g1 CHROMAT_FILE:
MSMg01no164_p14.g1 PHD_FILE: MSMg01no164_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:58 2005
(293 letters)
>mm_chr12_47907431_47908124
Length = 694
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 tctcaatagttgccaaactttcctacaaccatacattagtgacatgtccttaaaaccttg 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 201 tctcaatagttgccaaactttcctacaaccatacattagtgacgtgttcttaaaaccttg 260
Query: 61 ttttttatctcactggttaaaaataaacatcatcagaaaattttatacttaattctagcc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttttttatctcactggttaaaaataaacatcatcagataattttatacttaattctagcc 320
Query: 121 ca-ggagggcacacagaagtccatcaaattgtcagaccatacatacgctgaggacgagaa 179
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 caaggagggcacacagaagtccatcaaattgtcagaccatacatacactgaggacgagaa 380
Query: 180 gagcaaggaagcagctaggtagacctttgactggggtctttaacccactggtctacagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcaaggaagcagctaggtagacctttgactggggtctttaacccactggtctacagga 440
Query: 240 gggcttttggctttagagttttgtttgtttgtttgtttgttt 281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcttttggctttagagttttgtttgtttgtttgtttgttt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
