Query= MSMg01no169_l07.b1 MSMg01no169_l07.b1 CHROMAT_FILE:
MSMg01no169_l07.b1 PHD_FILE: MSMg01no169_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:28 2005
(274 letters)
>mm_chr12_32893895_32894568
Length = 674
Score = 429 bits (222), Expect = e-125
Identities = 249/268 (92%), Gaps = 16/268 (5%)
Strand = Plus / Minus
Query: 7 gaattcagagcctgcctcctccctgttctccaagcctgtggaaactggaagccatctctc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaattcagagcctgcctcctccctgttctccaagcctgtggaaactggaagccatctctc 294
Query: 67 agtgattacctgcctggagcaggcagtttctagctccctaatgtcgccaggagagcaatg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agtgattacctgcctggagcaggcagtttctagctccctaatgtcgccaggagagcaatg 234
Query: 127 tcctcctgttttgtctgactaattcatcttcacacacacacacacacacacacacacaca 186
||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 233 tcctcctgttttgtctgactaattcatttt----------------cacacacacacaca 190
Query: 187 cacacacacacacacacactcattatatcagcaacaggcacacacattgcatgctgcagg 246
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 189 cacacacacacacacacactcagcatatcagcaacaggcacacacattgcatgctgcagg 130
Query: 247 actttcagtttgtgatattttgagactt 274
||||||||||||||||||||||||||||
Sbjct: 129 actttcagtttgtgatattttgagactt 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no169_l07.g1 MSMg01no169_l07.g1 CHROMAT_FILE:
MSMg01no169_l07.g1 PHD_FILE: MSMg01no169_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:28 2005
(151 letters)
>mm_chr12_32827664_32828214
Length = 551
Score = 273 bits (141), Expect = 4e-78
Identities = 147/149 (98%)
Strand = Plus / Plus
Query: 1 tgccctcctataataccagccctccaaaatacagagcagcttgccctagaggacgtccga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tgccctcctataataccagccctccaaaatacagaacagcttgccctagaggacgtccga 260
Query: 61 gaagctgtgtgcttagaggagtgaagtctcccactgtgcagaaggaaaagagtgtaggcg 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagctgtgtgcttagaagagtgaagtctcccactgtgcagaaggaaaagagtgtaggcg 320
Query: 121 tggagtggagggggtggagggaatggagg 149
|||||||||||||||||||||||||||||
Sbjct: 321 tggagtggagggggtggagggaatggagg 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
