Query= MSMg01no171_e20.b1 MSMg01no171_e20.b1 CHROMAT_FILE:
MSMg01no171_e20.b1 PHD_FILE: MSMg01no171_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:29 2005
(314 letters)
>mm_chr12_7496166_7496877
Length = 712
Score = 547 bits (283), Expect = e-160
Identities = 303/313 (96%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 5 gaattcaagaaagcaagaaagcaagaaagttctgtctcaatatagagggtaatgtaggaa 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaaagcaaggaagcaagaaagttctgtctcaatatagagggtaatgtaggaa 264
Query: 65 tgtacccaccatcaatgttgaacctctatatgtacatgcagacatg--tacttattatt- 121
|||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 265 tgtacccaccatcaatgttgaacctctatatgtacatgcagacatgggta-----tagtc 319
Query: 122 atttacttatgaacatatacagctacatgcatgtgaacacacagatgtacacagtacatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atttacttatgaacatatacagctacatgcatgtgaacacacagatgtacacagtacatt 379
Query: 182 cacacacatgtagactgcatacaggcaaagagaaaatgtaaatgcctgtgctgcgcagcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacacacatgtagactgcatacaggcaaagagaaaatgtaaatgcctgtgctgcgcagcc 439
Query: 242 ctagggccctttctcccctggggtctgtatctctgtttattcattttttttcctttctct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctagggccctttctcccctggggtctgtatctctgtttattcattttttttcctttctct 499
Query: 302 attcatttgatta 314
|||||||||||||
Sbjct: 500 attcatttgatta 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 712
Length adjustment: 9
Effective length of query: 305
Effective length of database: 703
Effective search space: 214415
Effective search space used: 214415
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_e20.g1 MSMg01no171_e20.g1 CHROMAT_FILE:
MSMg01no171_e20.g1 PHD_FILE: MSMg01no171_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:29 2005
(289 letters)
>mm_chr12_7672132_7672820
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 281/289 (97%)
Strand = Plus / Minus
Query: 1 caggctctaggccactcagaaacaatactgtgcatcacaggtctgctgagtgtccatcct 60
|||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 489 caggctctagaccactcagaaacaatactgtgcatcacaggtgtgctgtgtgtccatcct 430
Query: 61 gataaccctgtgtcagcttccaactgagatatgattctagtctgagcattaaagtcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gataaccctgtgtcagcttccaactgagatatgattctagtctgagcattaaagtcatct 370
Query: 121 cagagatgccagatgtagtttctccttgtgatcgccatagttccttcttctgagaccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cagagatgccagatgtagtttctccttgtgatcgccatagttccttcttctgagaccaag 310
Query: 181 attcagaagcggttttatcattaagacaatgaggcttaagattaagatttctcattgcac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 309 attcagaagcggttttatcattaagacaatgaggcttgagattaagatttcacattgcac 250
Query: 241 agccattttctttgtccaaaaaggcttatggctttaatgatcaaaaggt 289
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 249 agccattttcaaagtccaaaaaggcttatggctttaatgatcaaaaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
