Query= MSMg01no173_i06.b1 MSMg01no173_i06.b1 CHROMAT_FILE:
MSMg01no173_i06.b1 PHD_FILE: MSMg01no173_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:12 2005
(465 letters)
>mm_chr12_63528733_63529597
Length = 865
Score = 741 bits (383), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Minus
Query: 5 gaattcctgtacatccatctaccagtatatataaagcattatgttggtatgtttaatcct 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaattcctgtacatccatataccagtatatataaagcattatgttggtatgtttaatcct 332
Query: 65 ttaatctatgtacttttcctctgagtacgtgtaactcatctcatttcccatttgtcttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttaatctatgtacttttcctctgagtacgtgtaactcatctcatttcccatttgtcttca 272
Query: 125 gcttacaaattctgtcaaagtcctgttctcattatgctaccaaataacgtatggtagttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gcttacaaattctgtcaaagtcctgttctcattatgctaccaaataacgtatggtagttt 212
Query: 185 aggttaaaacaatatgaattcatcagactcccccaaagctcacagggactaaaccaccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aggttaaaacaatatgaattcatcagactcccccaaagctcacagggactaaaccaccaa 152
Query: 245 ccaaagagtacacatggagtgacccatggttccaaccacatatgtagcagaggatggact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 151 ccaaagagtacacatggagtgacccatggttccaaccacatatgtagcagaggatggcct 92
Query: 305 tgttggacataaatgggaggagaggcccttggtcctgttaaggctccatgccccagtgta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tgttggacataaatgggaggagaggcccttggtcctgttaaggctccatgccccagtgta 32
Query: 365 tgggaatgccaggacagagaagagggagtgg 395
|||||||||||||||||||||||||||||||
Sbjct: 31 tgggaatgccaggacagagaagagggagtgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_i06.g1 MSMg01no173_i06.g1 CHROMAT_FILE:
MSMg01no173_i06.g1 PHD_FILE: MSMg01no173_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:12 2005
(301 letters)
>mm_chr12_63397593_63398295
Length = 703
Score = 509 bits (263), Expect = e-148
Identities = 293/303 (96%), Gaps = 2/303 (0%)
Strand = Plus / Plus
Query: 1 tcttcaaaattcccgtaattgctacctttactcaagcgcgttcactgaggcaccattttc 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 201 tcttcaaaattcccgtaattgctacctttactcaagcgtgttcactgaggtaacattttc 260
Query: 61 tctcagtcattttcatgtgctgttttgtacaatgacaacatagcagcgatgaagccacag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tctcagtcattttcatgtgctgttttgtacaatgacaacatagcagcgacgaagccacag 320
Query: 121 gaaatcataagacataggaagagcaagggaggataaaa-tctcacag-aaatactcttag 178
| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 321 ggagtcataagacataggaagagcaagggaggataaaaatctcacaggaaatactcttag 380
Query: 179 gtacatgttagtaggaaaggaagtatgcaagaagtcatctaattattgtggtagtattca 238
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaatgttagtaggaaaggaagtatgcaagaagtcatctaattattgtggtagtattca 440
Query: 239 caatagctgagacatggactgacatgaaacatttatccagagataaatcttgtcttttga 298
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatagctgaaacatggactgacatgaaacatttatccagagataaatcttgtcttttga 500
Query: 299 agg 301
|||
Sbjct: 501 agg 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 703
Length adjustment: 9
Effective length of query: 292
Effective length of database: 694
Effective search space: 202648
Effective search space used: 202648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
