Query= MSMg01no174_n09.b1 MSMg01no174_n09.b1 CHROMAT_FILE:
MSMg01no174_n09.b1 PHD_FILE: MSMg01no174_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:47 2005
(316 letters)
>mm_chr12_71396312_71397027
Length = 716
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Plus
Query: 5 gaattcagcagcggacagtgaaaatacactggtagctatttatcagcagaaaatgctgta 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcagcagacagtgaaaatacactggtagctatttatcagcagaaaatgctgta 264
Query: 65 ttgtaaggatttatatgtgctgttttcataggataacttcctgagcacatttggaagcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtaaggatttatatgtgctgttttcataggataacttcctgagcacatttggaagcca 324
Query: 125 tagttggttcagcattattacttattgatctgttttccttaaagcattttaattctagct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagttggttcagcattattacttattgatctgttttccttaaagcattttaattctagct 384
Query: 185 cgtgctaacagaggtgctctgtattcagaatcacagagcagtgctgtgaattttctgcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtgctaacagaggtgctctgtattcagaatcacagagcagtgctgtgaattttctgcct 444
Query: 245 gtgcactgaagtcttgagagagagaaggatatggttccaaaggctgtttataattttgga 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgcactgaagtcttgagagggagaaggatatggttccaaaggctgtttataattttgga 504
Query: 305 tttcttggatat 316
||||||||||||
Sbjct: 505 tttcttggatat 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_n09.g1 MSMg01no174_n09.g1 CHROMAT_FILE:
MSMg01no174_n09.g1 PHD_FILE: MSMg01no174_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:47 2005
(648 letters)
>mm_chr12_71524822_71525866
Length = 1045
Score = 1172 bits (606), Expect = 0.0
Identities = 637/648 (98%), Gaps = 3/648 (0%)
Strand = Plus / Minus
Query: 1 acattgctattctctgcatctgagagtattcaacaggatcctgcatacggaagttgattg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 686 acattgctattctctgcatctgagagtattcaacaggatcctgcatatggaagttgattg 627
Query: 61 gcatgcagcctcccacgggcacacagaatggaagcagcatccccttgatccttgggtttt 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 626 gcatgcagcctcccacgggcacacagaatgggagcagcatccccttgatccttgggcttt 567
Query: 121 ccctctaaccagctcctgtacgttattgaatcagccgttccttcctaaattagaccttta 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 566 ccctctaaccagctcctgtacgttatcgaatcagccgttccttcctaaattagaccttta 507
Query: 181 ccttgagggatctattaaaagagttccggccatatcagtaattagactgcaaatggagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccttgagggatctattaaaagagttccggccatatcagtaattagactgcaaatggagat 447
Query: 241 aaaatagttgctagggactgttctgagtttgtatgtttccatcaacaaagcagaaaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaaatagttgctagggactgttctgagtttgtatgtttccatcaacaaagcagaaaaagc 387
Query: 301 tttagagtctaaaagtcagaaaagtttagagtctgcatttgttaccccagctcagctgca 360
|||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 386 tttagagtctaaaactcagaaaagtttag--tctgcatttgttatcccagctcagctgca 329
Query: 361 cagattgtagaatagtatgcgattttctgaactctgttatttagttttctcttaatgtaa 420
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ca-attatagaatagtatgcgattttctgaactctgttatttagttttctcttaatgtaa 270
Query: 421 agtgtagataataacagctcttattacataggcattgacttagggcttaatttatcatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agtgtagataataacagctcttattacataggcattgacttagggcttaatttatcatat 210
Query: 481 ttataaaagctcttgctgaattttcaggattttcaagttattgttaaacataattcctat 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttataaaagttcttgctgaattttcaggattttcaagttattgttaaacataattcctat 150
Query: 541 tagaaattaagcaattaataaacaaattatatgaagtaaaaaataaatgctcaaacactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tagaaattaagcaattaataaacaaattatatgaagtaaaaaataaatgctcaaacactc 90
Query: 601 actttaaaaatatttaactattttaataatctctatgttttcaaggtt 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 actttaaaaatatttaactattttaataatctctatgttttcaaggtt 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1045
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1035
Effective search space: 660330
Effective search space used: 660330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
