Query= MSMg01no182_f19.b1 MSMg01no182_f19.b1 CHROMAT_FILE:
MSMg01no182_f19.b1 PHD_FILE: MSMg01no182_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:05 2005
(301 letters)
>mm_chr12_35755093_35755795
Length = 703
Score = 520 bits (269), Expect = e-152
Identities = 294/303 (97%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 1 gtgtatttattcttgttgtatgtatacctgctgtgcacatgcactgagtcagacgacaac 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 503 gtgtatttattcttgttgcatgtatacctgctgtgcacatgcactgagtcagaggacaac 444
Query: 61 tctggagggcacgatttccttccacttttgcatgagttctggtgatgagagccatcttgt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctggagggcacgatttccttctacttttgcatgagttctggtgatgagagccatcttgt 384
Query: 121 atgctcaaactctgtggtttttcttaacaagaatttatcaattcaggaacagttacacca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgctcaaactctatggtttttcttaacaagaatttatcaattcaggaacagttacacca 324
Query: 181 agtataaagtaatagcaggcaaaaaaatatatata--tacactatttattagaatataaa 238
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 323 agtataaagtaatagcaggcaaaaaaaaatatatagatacactatttattagaatataaa 264
Query: 239 ctagattaatctgcatttttcctccttgttcccatattgcaaacagtggaatcaattgaa 298
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 263 ctagattaatctgcatttttcctccttattcccataatgcaaacagtggaatcaattgaa 204
Query: 299 tta 301
|||
Sbjct: 203 tta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 703
Length adjustment: 9
Effective length of query: 292
Effective length of database: 694
Effective search space: 202648
Effective search space used: 202648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_f19.g1 MSMg01no182_f19.g1 CHROMAT_FILE:
MSMg01no182_f19.g1 PHD_FILE: MSMg01no182_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:05 2005
(286 letters)
>mm_chr12_35597227_35597912
Length = 686
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 ctagggtgctttctggggcagccctcaagtttgggtttcctcaacacctgggaaactgag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ctagggtgctttctggggcagccctcaagtttgggtttcctcaacagctgggaaactgag 260
Query: 61 tcagaccacttgtccatgactccttggagaacaccctgagcaaagggcagagtttcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagaccacttgtccatgactccttggagaacaccctgagcaaagggcagagtttcatga 320
Query: 121 accaagaaacgacccagcaagcaaaatagaggattccaaaaccactgtaatatttcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaagaaacgacccagcaagcaaaatagaggattccaaaaccactgtaatatttcccca 380
Query: 181 tggctgtgctttcttttgttatccagaaaaacatttggacgcattcattggtccatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggctgtgctttcttttgttatccagaaaaacatttggacgcattcattggtccatttca 440
Query: 241 tgaaagttccagttctcaccaagcactttttttcccctagaactcc 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaagttccagttctcaccaagcactttttttcccctagaactcc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
