Query= MSMg01no183_c13.b1 MSMg01no183_c13.b1 CHROMAT_FILE:
MSMg01no183_c13.b1 PHD_FILE: MSMg01no183_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:06 2005
(469 letters)
>mm_chr12_7062804_7063672
Length = 869
Score = 799 bits (413), Expect = 0.0
Identities = 445/469 (94%), Gaps = 22/469 (4%)
Strand = Plus / Plus
Query: 1 gcaggttaccatgcatttaccttcgcaaatgctgacaggagtcaagatgggatataacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 gcaggttaccatgcatttaccttcgcaaatgctgacaggagtcaagatgggatataagca 260
Query: 61 attggatctgacgataatatattctatctgcaattgttagagatgtatgcaagatcgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attggatctgacgataatatattctatctgcaattgttagagatgtatgcaagatcgcag 320
Query: 121 gcaacaccttccttttgaatttcaaatgctatataaccttttggagataacaagggatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaacaccttccttttgaatttcaaatgctatataaccttttggagataacaagggatat 380
Query: 181 tcatctgaaataatggtaggaaatttctaacagagactacataattagttgttattcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatctgaaataatggtaggaaatttctaacagagactacataattagttgttattcttt 440
Query: 241 gcaagtaccacatacgctgataggaacaggttcagaaaaatatcgtctctcagtaaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaagtaccacatacgctgataggaacaggttcagaaaaatatcgtctctcagtaaatgt 500
Query: 301 ttctctctctctctctctctctctctctctctctctctctctctctccccccctctctct 360
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ttctctctctctctctctctctctctccctctctctctctctctctc------------- 547
Query: 361 ctctctctccctccctccctcctctaattttctccctctctcccatttacatttctcctt 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 548 -----tctccctccctcc----tctaattttctccctctctcccatttacatttctcctt 598
Query: 421 ccttcttctctctctctccttctctttctttgaatggaacagatttact 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ccttcttctctctctctccttctctttctttgaatggaacagatttact 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_c13.g1 MSMg01no183_c13.g1 CHROMAT_FILE:
MSMg01no183_c13.g1 PHD_FILE: MSMg01no183_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:06 2005
(287 letters)
>mm_chr12_7243555_7244241
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Minus
Query: 1 agaggatggactgaaatgccctcctttgtattttcataatcttggagattaatcactagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agaggatggactgaaatgccctcctttgtattttcataatcttggagattaatcactagt 428
Query: 61 tagtatgtgaaggaatttttaatggactatattcccctcagccacaatttgttctcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tagtatgtgaaggaatttttaatggactatattcccctcagccacaatttgttctcatgt 368
Query: 121 gtccccatactcattaacctcagagttttctccatgtctttattccttttgtctctttcc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 367 gtccccatactcattaacctcagagttttctccatgtctttattccttctgtctctttcc 308
Query: 181 caagatgtttaagacatcacacttaactacatctcaattggaaagctcactacacaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caagatgtttaagacatcacacttaactacatctcaattggaaagctcactacacaggcc 248
Query: 241 tgaaccccaagcatctcgcgacttcgtttctcttatgtatactctta 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgaaccccaagcatctcgcgacttcgtttctcttatgtatactctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
