Query= MSMg01no185_b24.b1 MSMg01no185_b24.b1 CHROMAT_FILE:
MSMg01no185_b24.b1 PHD_FILE: MSMg01no185_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(321 letters)
>mm_chr12_27591874_27592594
Length = 721
Score = 613 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 4 ggaattcaaactttcccagaattttctggttttgaatctttattatctgtcgcttgtcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaactttcccagaattttctggttttgaatctttattatctgtcgcttgtcta 263
Query: 64 tgcctgagtcagccatgtatgtgatagtgtataagtgtccacagtcttattgacagtgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcctgagtcagccatgtatgtgatagtgtataagtgtccacagtcttattgacagtgac 323
Query: 124 ataatccccaagaaaatgaaagatctaactctatgattcacaggtaaaacaagggaatca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataatccccaagaaaatgaaagatctaactctatgattcacaggtaaaacaagggaatca 383
Query: 184 taagtccacaagtatgatcaaaacatcaacaggagtaaaatagtcatttgaaatacaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taagtccacaagtatgatcaaaacatcaacaggagtaaaatagtcatttgaaatacaaag 443
Query: 244 tatttcagtccatatttttaacacagtgaatgtcccctctatatgaattttctctttaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatttcagtccatatttttaacacagtgaatgtcccctctatatgaattttctctttaga 503
Query: 304 ggattcctacaaaaata 320
|||||||||||||||||
Sbjct: 504 ggattcctacaaaaata 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_b24.g1 MSMg01no185_b24.g1 CHROMAT_FILE:
MSMg01no185_b24.g1 PHD_FILE: MSMg01no185_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(291 letters)
>mm_chr12_27776937_27777630
Length = 694
Score = 545 bits (282), Expect = e-160
Identities = 290/294 (98%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 tatgtactgtgcactcagtaaatcattttcttgaggtataagacccagccctg---cccc 57
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 494 tatgtactgtgcactcagtaaatcattttcttgaggtataagacccagccttgccccccc 435
Query: 58 cccccccaatttctgtgatgattaccagactctcccgttaggatttaaccatttgatccc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cccccccaatttctgtgatgattaccagactctcccgttaggatttaaccatttgatccc 375
Query: 118 caagttcctatgttgaagcctaaagtgaccatcagaagacatgtcctgtgacaggaacac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caagttcctatgttgaagcctaaagtgaccatcagaagacatgtcctgtgacaggaacac 315
Query: 178 ccttgttgaatgaggctacccagcagtgggaccacaatccaacagaattgtgtgtccttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccttgttgaatgaggctacccagcagtgggaccacaatccaacagaattgtgtgtccttg 255
Query: 238 ttgataaggaaatggacactgtgggtgcaagctctcctaagaaaggccaggaga 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttgataaggaaatggacactgtgggtgcaagctctcctaagaaaggccaggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 694
Length adjustment: 9
Effective length of query: 282
Effective length of database: 685
Effective search space: 193170
Effective search space used: 193170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
