Query= MSMg01no186_b14.b1 MSMg01no186_b14.b1 CHROMAT_FILE:
MSMg01no186_b14.b1 PHD_FILE: MSMg01no186_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:59 2005
(222 letters)
>mm_chr12_81158455_81159077
Length = 623
Score = 389 bits (201), Expect = e-113
Identities = 212/216 (98%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcatcacttccctctgccatgttgccatggaaatggtactcagaaaacaaaa 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcatcacttccctctaccatgttgccatggaaatggtactcagaaaacaaaa 264
Query: 65 caagaagtttgaaaagccattacacatttggggtaatttttaaagtgccatatttccttt 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 caagaagtttgaaaagccattacacatttggggtaattttaaaagtgccatatttccttt 324
Query: 125 ctataaccagttgtattttaaaagcaagaccgtgctttatcatcatcatcnccattacta 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 ctataaccagttgtattttaaaagcaagaccgtgctttatcatcatcatcaccattacta 384
Query: 185 ttatttattgtaagatggtgtctag-ctatcctcaa 219
||||||||||||||||||||||||| ||||||||||
Sbjct: 385 ttatttattgtaagatggtgtctaggctatcctcaa 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 623
Length adjustment: 9
Effective length of query: 213
Effective length of database: 614
Effective search space: 130782
Effective search space used: 130782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no186_b14.g1 MSMg01no186_b14.g1 CHROMAT_FILE:
MSMg01no186_b14.g1 PHD_FILE: MSMg01no186_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:59 2005
(240 letters)
>mm_chr12_81319858_81320497
Length = 640
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Minus
Query: 1 tcctgctgtgcaggctcaatcttatgttatgaattcttccttgtgcggggcaaggaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcctgctgtgcaggctcaatcttatgttatgaattcttccttgtgcggggcaaggaagac 381
Query: 61 catgccaggtcctcatggtgagccctttccaagcagggatccagcagcccttttgacctg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catgccaggttctcatggtgagccctttccaagcagggatccagcagcccttttgacctg 321
Query: 121 ggtgatcccttctcctggtctctggcactgtgtctacttaaatgggctctagacagatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggtgatcccttctcctggtctctggcactgtgtctacttaaatgggctctagacagatac 261
Query: 181 aaactagaaaacacagctctagaagagttctgctagaagctgatgtgtgtttcctcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaactagaaaacacagctctagaagagttctgctagaagctgatgtgtgtttcctcatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
