Query= MSMg01no186_d11.b1 MSMg01no186_d11.b1 CHROMAT_FILE:
MSMg01no186_d11.b1 PHD_FILE: MSMg01no186_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:08 2005
(322 letters)
>mm_chr12_57103646_57104367
Length = 722
Score = 571 bits (295), Expect = e-167
Identities = 310/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Minus
Query: 5 gaattcagtccctggtatcagggagctcacagttcagtgaacaacaaacaaataaaccat 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 gaattcagtccctggtatcagggagctcacagttcagtgaac----gacaaataaaccat 362
Query: 65 tgccaaccaaaaacaggcttatgaaggaaaacagaatgtcctgaaatgaaatgatcagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgccaaccaaaaacaggcttatgaaggaaaacagaatgtcctgaaatgaaatgatcagga 302
Query: 125 acataattccgcaaacacctccaagaaaacctgttgtttattttagtttttcaaaacaag 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 acataattccgcaaacacctccaagaaaacctgttgtttattttactttttcaaaacaag 242
Query: 185 gtttctctgtgtagccctggctgtcctggaacccactttgttggccaggctggcctcgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttctctgtgtagccctggctgtcctggaacccactttgttggccaggctggcctcgaa 182
Query: 245 ctcagagattcaactgcctctgcctcccaagtactggggttaaaggtgtgtgctcccaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcagagattcaactgcctctgcctcccaagtactggggttaaaggtgtgtgctcccaag 122
Query: 305 cctagctgtttttttta 321
||||||||||| |||||
Sbjct: 121 cctagctgtttgtttta 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_d11.g1 MSMg01no186_d11.g1 CHROMAT_FILE:
MSMg01no186_d11.g1 PHD_FILE: MSMg01no186_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:08 2005
(285 letters)
>mm_chr12_56941817_56942502
Length = 686
Score = 499 bits (258), Expect = e-146
Identities = 279/286 (97%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 caagtgt-gtttttttttttgaataatattgacgttttatgaacgtagtcatttttggtg 59
||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caagtgtggttttttttttttaataatattgacgttttatgaatgtagtcatttttggtg 260
Query: 60 ctaagttctcaagaattagtgtaaagtcaaaaatgagttaattacttcattgacttcatt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagttctcaagaattagtgtaaagtcaaaaatgagttaattacttcattgacttcatt 320
Query: 120 acttcatagcttttaagaagattgaaaaatgggtaaacactagatgctctagagacttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcatagcttttaagaagattgaaaaatgggtaaacactagatgctctagagacttgg 380
Query: 180 agttttaactaatttgacattatattaattctatggtggtaattattttggataaaaatt 239
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttttaacgaatttgacattacgttaattctatggtggtaattattttggataaaaatt 440
Query: 240 gtttaatttcttttaaactggaccttggatgtccagtttcatatta 285
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttaatttcttttaaactggaccttggatgtccagtttcatatta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
