Query= MSMg01no189_o04.b1 MSMg01no189_o04.b1 CHROMAT_FILE:
MSMg01no189_o04.b1 PHD_FILE: MSMg01no189_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:58 2005
(562 letters)
>mm_chr12_48843294_48844255
Length = 962
Score = 1035 bits (535), Expect = 0.0
Identities = 550/555 (99%)
Strand = Plus / Plus
Query: 8 ttcatgctactttcatcagtgaagtatgactttattgctgtctttcagagaaattttctt 67
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcatgctactttcatcaatgaagtatgactttattgctgtctttcagagaaattttctt 267
Query: 68 caaaaccaacttcttaacactcaaaacttatctaatcaaaatattcataagcaatgctca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caaaaccaacttcttaacactcaaaacttatctaatcaaaatattcataagcaatgctca 327
Query: 128 ttttattactgcaggcttaatggttctagtggaatttcttttaatattccctttgaattt 187
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 328 ttttattactgcaggcttaatgattctagtggaatttcatttaatattccctttgaattt 387
Query: 188 gttttttcaaaatcaattaattcttaattctaatttcagttcttctgagccattgattct 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttttttcaaaatcaattaattcttaattctaatttcagttcttctgagccattgattct 447
Query: 248 tttcctcattaggttcttttaatcacttgacttctcaaaaagccacagttcaatttctaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttcctcattaggttcttttaatcacttgacttctcaaaaagccacagttcaatttctaa 507
Query: 308 gagacatttcctctggaaaaataaacacttaataaatataaatgtagcattcctaatatg 367
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 508 gagacatttcctctggaaaaataaaaacttaataaatataaatgtagcattcctaatatg 567
Query: 368 ccttacctactcatgattcttcctctgcttttacacagagtgacagaaaatatggaagac 427
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ccttccctactcatgattcttcctctgcttttacacagagtgacagaaaatatggaagac 627
Query: 428 aaaataaaagtgaattacccctggtcctttctgtgtgcatcatttcagtatccacattac 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aaaataaaagtgaattacccctggtcctttctgtgtgcatcatttcagtatccacattac 687
Query: 488 ctgtaatggtacatgaagcctatgagcatgttaaatgcaacactagttttctatgacact 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctgtaatggtacatgaagcctatgagcatgttaaatgcaacactagttttctatgacact 747
Query: 548 cctgtgaaataaaat 562
|||||||||||||||
Sbjct: 748 cctgtgaaataaaat 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_o04.g1 MSMg01no189_o04.g1 CHROMAT_FILE:
MSMg01no189_o04.g1 PHD_FILE: MSMg01no189_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:58 2005
(654 letters)
>mm_chr12_48897356_48898409
Length = 1054
Score = 1166 bits (603), Expect = 0.0
Identities = 642/655 (98%), Gaps = 2/655 (0%)
Strand = Plus / Minus
Query: 1 taagaactagttcctttgatggtgatttgcataatggaaatattcaagatgctgttaaaa 60
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 taagaactagctcatttgatggtgatttgcataatggaaatattcaagatgctgttaaaa 795
Query: 61 atatttgaagaaagtaaaagaaggtaaaatgaggatagaaatacatacagttatcctatg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 794 acatttgaagaaagtaaaagaaggtaaaatgaggatagaaatacatacagttgtcctatg 735
Query: 121 tagtaaaagaagtatcaagatctctatagtgaaatgaatttttatgtgagtaccaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tagtaaaagaagtatcaagatctctatagtgaaatgaatttttatgtgagtaccaaattg 675
Query: 181 tggtaaaggagaaaatgaatttgtacagtatggttttctagttgccattgatcaatagtg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 674 tggtaaaggagaaaatgaatttgtacagtatggttttctagttgctattgatcaatagtg 615
Query: 241 aaactgtgattttaggtgatgtagcttaatcccgttaaggggattttctaaaaataaaaa 300
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 614 aaactgtgattttaggtgacatagcttaatcccgttaaggggattttctaaaaataacaa 555
Query: 301 atctggaagctggcacagcca-agcatttttagtaatcagaataaatttcttttaccata 359
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 554 atctggaagctggcacagccata-catttttagtaatcagaataaatttcttttaccata 496
Query: 360 atgggaaattgttagcacaacaatggaccatctcatttgcattttgtataattataaggc 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgggaaattgttagcacaacaaaggaccatctcatttgcattttgtataattataaggc 436
Query: 420 cataaaagtgtttaaaggaagcattaatttatttcactggaactgagaatggaaaataat 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cataaaaatgtttaaaggaagcattaatttatttcactggaactgagaatggaaaataat 376
Query: 480 ttaatagagacagtgattgagatgggacatgaaattgatttatatgatgtttgaagtagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttaatagagacagtgattgagatgggacatgaaattgatttatatgatgtttgaagtagt 316
Query: 540 attttattaggacaaaggtccatgtgggtacagctcatgaaaatcagtcagctgtataca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 315 attttattaggacaaaggtccatgtgggtacagctcatgaaaatcagtcagctatataca 256
Query: 600 gtaagtaggatatttttgaatacatgtagtatttcaccttaattatcattttaaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtaagtaggatatttttgaatacatgtagtatttcaccttaattatcattttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
