Query= MSMg01no190_f09.b1 MSMg01no190_f09.b1 CHROMAT_FILE:
MSMg01no190_f09.b1 PHD_FILE: MSMg01no190_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:33 2005
(315 letters)
>mm_chr12_16936672_16937386
Length = 715
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggacagcaagagctacacagagaaaccctgtnctcgaaaaacaaaaacaaaa 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 629 gaattccaggacagcaagagctacacagagaaaccctgt-ctcgaaaaacaaaaacaaaa 571
Query: 65 caaaacaacaacaacaacaaaaaccaaaaccaaaaaactaaaagaaaaacaagaataggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 caaaacaacaacaacaacaaaaaccaaaaccaaaaaactaaaagaaaaacaagaataggt 511
Query: 125 caagatctgacatccatctgttcaaaatccaatcccaaattctagtatctcttttataac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 caagatctgacatccatctgttcaaaatccaatcccaaattctagtatctcttttataac 451
Query: 185 tgcgataatcttaagcatgcagaaaacaatgtatttgtgtaaaatatgtgatttggctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgcgataatcttaagcatgcagaaaacaatgtatttgtgtaaaatatgtgatttggctct 391
Query: 245 atatatcaaataagcaataaaaataacaaaacaacccatagggagtactctaactagcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 390 atatatcaaataagcaataaaaataacaaaacaacccatagggagtactctaactagtat 331
Query: 305 tacttattaat 315
|||||||||||
Sbjct: 330 tacttattaat 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_f09.g1 MSMg01no190_f09.g1 CHROMAT_FILE:
MSMg01no190_f09.g1 PHD_FILE: MSMg01no190_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:33 2005
(294 letters)
>mm_chr12_16795453_16796146
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Plus
Query: 1 actgtgtagaccagactggcttcaaactcatagagatctgcctgcttctgactccagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtagaccagactggcttcaaactcatagagatctgcctgcttctgactccagagt 260
Query: 61 gctgggattaactgtaccatccatgttaaaaggctgttccacattagataccatttcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgggattaactgtaccatccatgttaaaaggctgttccacattagataccatttcctt 320
Query: 121 ctcactctggggggcatcttttctctgtgtccttactgtaagtattccacttcacacgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcactctggggggcatcttttctctgtgtccttactgtaagtattccacttcacacgtt 380
Query: 181 ttgatagctgcagatatcaaatattctttgacataatttctttatattacgagatttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ttgatagctgcagatatcaaatattctttgacataatttctttatattatgagatttggg 440
Query: 241 ctttgaagaaatggaagttgtattgcggtcttctctgcttaatcaaatatttac 294
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ctttgaagaaatggaagttgtattgtggtcttctctgcttaatcaaatatttac 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
