Query= MSMg01no193_i19.b1 MSMg01no193_i19.b1 CHROMAT_FILE:
MSMg01no193_i19.b1 PHD_FILE: MSMg01no193_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:02 2005
(418 letters)
>mm_chr12_105922757_105923574
Length = 818
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%)
Strand = Plus / Minus
Query: 17 aatgagaactgggcccttctgagtttcagtgctgccttacagggtgatcagggccctgtg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aatgagaactgggcccttctgagtttcagtgctgccttacagggtgatcagggccctgtg 559
Query: 77 atacaagtaagatgtatagaattgagaggagccggtggagaactgtctcaaaagctttgg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atacaagtaagatgtatagaattgagaggagccggtggagaactgtctcaaaagctttgg 499
Query: 137 tctggaacactgcatcttgcagctgatgtttcttctttaaactttggctactaagcgact 196
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 498 tctggaacactgcatcttgcagctgatgtttcttctttaaactttggctactaagcaact 439
Query: 197 cagttcaccccttcaaaactctggagacacggcagtaagtaacgtaacactcctgacctg 256
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 cagttcaccccttcaaaactctggagacacggcagtaagtaacgtaacacccctgacctg 379
Query: 257 gtcttaggcagctacatcctgtgggaaaaacagctatacccaaatcagtagatactatca 316
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 378 gtcttaggcagctacatcctgtgggaaaaacagctatacccaaatcaatagatactatca 319
Query: 317 gctggtaacaaagcagttctctgggtagcagctactcgtttcctgttgtccccatccctg 376
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 318 gctggtaacaaagcagttctctgggtagcagcttctcatttcctgttgtccccatccctg 259
Query: 377 cttccaccctgtcctggagcatcatcggggctgttgtgctgt 418
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 258 cttccaccctgtcctggagcagcatcggggctgttgtgctgt 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_i19.g1 MSMg01no193_i19.g1 CHROMAT_FILE:
MSMg01no193_i19.g1 PHD_FILE: MSMg01no193_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:03 2005
(378 letters)
>mm_chr12_105891436_105892214
Length = 779
Score = 710 bits (367), Expect = 0.0
Identities = 376/379 (99%), Gaps = 1/379 (0%)
Strand = Plus / Plus
Query: 1 tttgctttcc-acacgcatgtgctcagctgagcagcaatcctaactcccctgtgcaggaa 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctttccaacacgcatgtgctcagctgagcagcaatcctaactcccctgtgcaggaa 260
Query: 60 ctctctgtctgcactcacaggttttctgtttgtagcaagaggcctagggcttgggacaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctgtctgcactcacaggttttctgtttgtagcaagaggcctagggcttgggacaag 320
Query: 120 gcaggcaggaggttcactcaacaaggggctgccacaaaactccatcggtgacaagcatgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaggcaggaggttcactcaacaaggggctgccacaaaactccatcggtgacaagcatgg 380
Query: 180 tatcttaaaacagagcagagccaaagggaggccccacttgtatgtagatttgtgagggac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcttaaaacagagcagagccaaagggaggccccacttgtatgtagatttgtgagggac 440
Query: 240 tcatcaggagcctctgccatggaactgaggaggccaagagctcccactatttcagagggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tcatcaggagcctctgccatggaactgaggaggccaagagctcccactatttcagggggg 500
Query: 300 tgagctgagaagagctgtgatgtcattatatccctgaccaatagggcgggagctgggacc 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tgagctgagaagagctgtgatgtcattagatccctgaccaatagggcgggagctgggacc 560
Query: 360 aggtgggcaatatatgccc 378
|||||||||||||||||||
Sbjct: 561 aggtgggcaatatatgccc 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 779
Length adjustment: 9
Effective length of query: 369
Effective length of database: 770
Effective search space: 284130
Effective search space used: 284130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
