Query= MSMg01no194_f12.b1 MSMg01no194_f12.b1 CHROMAT_FILE:
MSMg01no194_f12.b1 PHD_FILE: MSMg01no194_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:11 2005
(593 letters)
>mm_chr12_4654829_4655824
Length = 996
Score = 1122 bits (580), Expect = 0.0
Identities = 588/592 (99%), Gaps = 3/592 (0%)
Strand = Plus / Plus
Query: 5 gaattctctttagtcctggcttctatcactaattgctagtatttattgagaatctaagta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttagtcctggcttctatcactaattgctagtatttattgagaatctaagta 264
Query: 65 tgaaacctgcaacactataagcactttacctggattaattcattttatctgaacagcagc 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaaacctgcaatactataagcactttacctggattaattcattttatctgaacagcagc 324
Query: 125 tctgtgagacatgttcaaattaggaaactaaaactttcatgcgctaatacaagtatagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtgagacatgttcaaattaggaaactaaaactttcatgcgctaatacaagtatagtt 384
Query: 185 gacagaacctgactcagacttttgtggacgtctcctagaggcattctctctaacattaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacagaacctgactcagacttttgtggacgtctcctagaggcattctctctaacattaaa 444
Query: 245 caacccataaccactgtcctcttttgtttctcagtagaacttagagacaaaaacaacaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caacccataaccactgtcctcttttgtttctcagtagaacttagagacaaaaacaacaaa 504
Query: 305 taaaatcacagaagctaagagctgtgtgagacttaacctgaacacagcatttgtgtaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaatcacagaagctaagagctgtgtgagacttaacctgaacacagcatttgtgtaagt 564
Query: 365 cccagacatttggacagtctcagtcaccacactacccctaggccaggtatacagctcagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccagacatttggacagtctcagtcaccacactacccctaggccaggtatacagctcagc 624
Query: 425 tggtttacctctggcttagcgtggttctggaaatatacaggttttcctgatttgggtttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggtttacctctggcttagcgtggttctggaaatatacaggttttcctgatttgggtttg 684
Query: 485 gagttctgtcactaggagggtgaggggacaccatacatttgaaaaaaaaaaaaaa---gc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 gagttctgtcactaggagggtgaggggacaccatacatttgaaaaaaaaaaaaaaaaagc 744
Query: 542 aactaaaacacattcagatattgtctagctctattatttaccattaaatttc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aactaaaacacattcagatattgtctagctctattatttaccattaaatttc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 996
Length adjustment: 10
Effective length of query: 583
Effective length of database: 986
Effective search space: 574838
Effective search space used: 574838
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_f12.g1 MSMg01no194_f12.g1 CHROMAT_FILE:
MSMg01no194_f12.g1 PHD_FILE: MSMg01no194_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:11 2005
(289 letters)
>mm_chr12_4665574_4666262
Length = 689
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Minus
Query: 3 cacaccattccttgaccaacctgacttcactctttcctcaacattgtgcagacaagactc 62
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 489 cacaccattccttgaccaacctgacttcactctttcctcaacattgtgcaaacaagtctc 430
Query: 63 tctgcagacacctctaactcaggtgcccagtgatctccctcctcttactctttcactaag 122
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttgcggacacctctaactcaggtgcccagtgatctccctcctcttactctttcactaag 370
Query: 123 gacttctgggtatggtgaagcctggcttctgttgagggcccaaagcaaatgacctgctcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gacttctgggtatggtgaagcctggcttctgttgagggcccaaagcaaatgacctgctcc 310
Query: 183 tcctagagcacactccaatttcacagaatggccaagatgccctcccctccatatgccctc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tcctagagcacactccaatttcacagaatggccaagatgccctcccctccatatgccctc 250
Query: 243 agaacagtgcagatgtatttattgaatttctcagacctcacagttac 289
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agaacagtgcagatgtatttattgaatttctcagacctcacagttac 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
