Query= MSMg01no195_o04.b1 MSMg01no195_o04.b1 CHROMAT_FILE:
MSMg01no195_o04.b1 PHD_FILE: MSMg01no195_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:14 2005
(687 letters)
>mm_chr12_27052083_27053170
Length = 1088
Score = 1317 bits (681), Expect = 0.0
Identities = 684/685 (99%), Gaps = 1/685 (0%)
Strand = Plus / Plus
Query: 4 ggaattgccatctccactagaatggctggtcacagagtccccatccatgacattcctcat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattgccatctccactagaatggctggtcacagagtccccatccatgacattcctcat 263
Query: 64 caccatgaccaagtcccaagtgccaaagacaacagccagtgtcaagaaaccagacagctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caccatgaccaagtcccaagtgccaaagacaacagccagtgtcaagaaaccagacagctg 323
Query: 124 gagcaagaggaaattaggcaagggttcgcaggcttggaaatggaagagaacatgggggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagcaagaggaaattaggcaagggttcgcaggcttggaaatggaagagaacatgggggaa 383
Query: 184 atctgtacactacactgctgtcccagaggaacccatgtgacttcctggtgagtgctaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atctgtacactacactgctgtcccagaggaacccatgtgacttcctggtgagtgctaagt 443
Query: 244 ccagtttgtgagtccagccaatggtagagtttgcaataaaaacaagacaaaaggacagtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccagtttgtgagtccagccaatggtagagtttgcaataaaaacaagacaaaaggacagtg 503
Query: 304 ggaaacccagatgcgatatcaaaacatcagatagaagctgaagagatggctcctttcaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggaaacccagatgcgatatcaaaacatcagatagaagctgaagagatggctcctttcaaa 563
Query: 364 ggacccaagttcaattctcaggacccacatggcagctcacagacatctgtaacaccagtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggacccaagttcaattctcaggacccacatggcagctcacagacatctgtaacaccagtt 623
Query: 424 ccaggaaatcagattccttcttctggcagaagccaggcatgtgcataaaacacagacata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaggaaatcagattccttcttctggcagaagccaggcatgtgcataaaacacagacata 683
Query: 484 catgctagcaaaacactcaaatacatactttaaaaaattaaaaatgttagataaaatggc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 catgctagcaaaacactcaaatacatactttaaaaaattaaaaatgttagataaaatggc 743
Query: 544 agttatttttttctgtctttactagaagttctaggaagccatacttcatattaaa-gaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 744 agttatttttttctgtctttactagaagttctaggaagccatacttcatattaaaagaaa 803
Query: 603 caaagaaaaaaatatggcttctcaaaatgttcatacagtagagtcaggagtgaccctatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caaagaaaaaaatatggcttctcaaaatgttcatacagtagagtcaggagtgaccctatt 863
Query: 663 actcataatctagatgctcagagcc 687
|||||||||||||||||||||||||
Sbjct: 864 actcataatctagatgctcagagcc 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1088
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1078
Effective search space: 729806
Effective search space used: 729806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_o04.g1 MSMg01no195_o04.g1 CHROMAT_FILE:
MSMg01no195_o04.g1 PHD_FILE: MSMg01no195_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:14 2005
(653 letters)
>mm_chr12_27089777_27090829
Length = 1053
Score = 1263 bits (653), Expect = 0.0
Identities = 653/653 (100%)
Strand = Plus / Minus
Query: 1 ctaaatgattggaatttcctgcattccactttccctctagaaatctgttcagctgaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ctaaatgattggaatttcctgcattccactttccctctagaaatctgttcagctgaaacc 794
Query: 61 cacagaatcccttctctccagctccacagcctgtcccttgatgctagctgcggggtgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cacagaatcccttctctccagctccacagcctgtcccttgatgctagctgcggggtgagc 734
Query: 121 ctgcaggtgcatggatttcacaggctgagcaaagactgagccccaccctccatccagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctgcaggtgcatggatttcacaggctgagcaaagactgagccccaccctccatccagcac 674
Query: 181 tgtagtatcctgtgtctgatgggaatgtatcctgaaagacctggcttctcttgcttctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgtagtatcctgtgtctgatgggaatgtatcctgaaagacctggcttctcttgcttctga 614
Query: 241 ggcagttgtgcgagccagttggctgcagagagggactcttatctcttaatgctttaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggcagttgtgcgagccagttggctgcagagagggactcttatctcttaatgctttaatac 554
Query: 301 tctctggccttgttcctcattggctcccagctctgcttctttgacagtgcccgtgtttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tctctggccttgttcctcattggctcccagctctgcttctttgacagtgcccgtgtttcc 494
Query: 361 tctctgtcctagatgccggcaacagatcagctccagccaggagcagcagttccactgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctctgtcctagatgccggcaacagatcagctccagccaggagcagcagttccactgaac 434
Query: 421 ccgttgatgacacatgctggccatgagtgagtcctgtctctctgacagataagggctgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccgttgatgacacatgctggccatgagtgagtcctgtctctctgacagataagggctgtg 374
Query: 481 tttctaggtggcaggacctcccttgtgtggccgtaagccacaaacacaggcagatggagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttctaggtggcaggacctcccttgtgtggccgtaagccacaaacacaggcagatggagg 314
Query: 541 agatgggacagccctggagcctgtgtgctgtggagcttggcagctgactgctccggctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agatgggacagccctggagcctgtgtgctgtggagcttggcagctgactgctccggctca 254
Query: 601 ttctatttgagctgtttggatgtgggtgaacagtgtaaaaacacaatgtggag 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttctatttgagctgtttggatgtgggtgaacagtgtaaaaacacaatgtggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
