Query= MSMg01no203_k05.b1 MSMg01no203_k05.b1 CHROMAT_FILE:
MSMg01no203_k05.b1 PHD_FILE: MSMg01no203_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:51 2005
(343 letters)
>mm_chr12_35969408_35970150
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Plus
Query: 1 ctttagtcacagcttattcatgggatattttcacctgtctgccaaaggcttaaccctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ctttagtcacagcttattcatgggatattttcacctgtctgccaaaggcttaaaactaaa 260
Query: 61 acgtggagttattaagccatccagaaaatgtatttatgaactgtgattcctcataagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtggagttattaagccatccagaaaatgtatttatgaactgtgattcctcataagtaa 320
Query: 121 taaaggagaatagcaatcaaagggaatcctcttttccacaaaagccaggatttgtaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaggagaatagcaatcaaagggaatcctcttttccacaaaagccaggatttgtaatgc 380
Query: 181 caaatgttttaccctctgcttagagcaaatatgtcagacaaatttgatatgctaactcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatgttttaccctctgcttagagcaaatatgtcagacaaatttgatatgctaactcat 440
Query: 241 caaccacatattggggatattcatgctttaagaaattagaagtttccagtgctgtacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaccacatattggggatattcatgctttaagaaattagaagtttccagtgctgtacaac 500
Query: 301 ttgtgaatttaaggcagatgtatgttatgattcatttgaaaaa 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtgaatttaaggcagatgtatgttatgattcatttgaaaaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no203_k05.g1 MSMg01no203_k05.g1 CHROMAT_FILE:
MSMg01no203_k05.g1 PHD_FILE: MSMg01no203_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:51 2005
(215 letters)
>mm_chr12_36092952_36093567
Length = 616
Score = 408 bits (211), Expect = e-118
Identities = 214/215 (99%), Gaps = 1/215 (0%)
Strand = Plus / Minus
Query: 1 cagggaacaagagcagccagcgtgttgatcttggcaactgaataagagtctggtgaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagggaacaagagcagccagcgtgttgatcttggcaactgaataagagtctggtgaagct 356
Query: 61 tatcttccttctccat-ccccccccccacacacacacaaacagccatgtaggaaatatat 119
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tatcttccttctccatcccccccccccacacacacacaaacagccatgtaggaaatatat 296
Query: 120 gtttgttgtccttggagaatgacatcgcttcccctttctatatgcccttttacagaagga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtttgttgtccttggagaatgacatcgcttcccctttctatatgcccttttacagaagga 236
Query: 180 tagtcagattcatgatttttgttttttttaacttt 214
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tagtcagattcatgatttttgttttttttaacttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 616
Length adjustment: 9
Effective length of query: 206
Effective length of database: 607
Effective search space: 125042
Effective search space used: 125042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
