Query= MSMg01no211_c10.b1 MSMg01no211_c10.b1 CHROMAT_FILE:
MSMg01no211_c10.b1 PHD_FILE: MSMg01no211_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:03 2005
(409 letters)
>mm_chr12_7265369_7266177
Length = 809
Score = 712 bits (368), Expect = 0.0
Identities = 395/404 (97%)
Strand = Plus / Plus
Query: 5 gaattctatggatctcctcccataaacagaagccatcagaaataaaatactttgacttta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatggatctcctcccataaacagaagccatcagaaataaaatactttgacttta 264
Query: 65 ctctaaattttccaaggcttcctggtgcttattggcttctgagaatgattagccaggtat 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctctaaactttccaaggcttcctggtgcttattggcttctgagaatgattagccaggtat 324
Query: 125 agataagttgcagcaatatttatatttggaagaataaaacatgaaatgtgtaaaagtcat 184
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 325 agataagttgcagcaatatttatatttggaagaataaaacattaaatgtgtgaaagtcat 384
Query: 185 gattcttttgggccacaatgggccagaggtgtattctcacttcttattttgtgttgacac 244
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 385 gattcttttgggccacaatgggccagaggtatattctcacttcttattttgtgttgtcac 444
Query: 245 aagcatgaagggctatgaattctcctctgaattttacttgtgtatcccccgtgtgttgtg 304
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 aagcatgaagggctatgaattctcctctgaattttacttgtgtatcccccatgtgttgtt 504
Query: 305 ctgctgctttccagagaatgtgaaagtttcttgaatttcttttaagagctttaatgaatg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 ctgctgctttccagagaatgtgaaagtttcttgaatttcttttaagagctttaaggaatg 564
Query: 365 catggagaggtgactcagttgtataaaaacaaaacaaaacaaaa 408
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgaagaggtgactcagttgtataaaaacaaaacaaaacaaaa 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_c10.g1 MSMg01no211_c10.g1 CHROMAT_FILE:
MSMg01no211_c10.g1 PHD_FILE: MSMg01no211_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:03 2005
(416 letters)
>mm_chr12_7303486_7304301
Length = 816
Score = 694 bits (359), Expect = 0.0
Identities = 374/379 (98%)
Strand = Plus / Minus
Query: 1 cacatggcaaggagccagctgtttagaggatctctgtcagtcacatcacttaacagattg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 579 cacatggcaaggagccagctgtttagaggagctctgtcagtcacatcacttaacagattg 520
Query: 61 gcatcacttcagcagaactctgtgagagggaaagatcacatggccaaactagaagtacaa 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 519 gcatcacttcagcagaactctgtgagagggaaagatcacacggccaaactagaagtacaa 460
Query: 121 cttaagacatgacccatgtcctaacccatgagcatgatcttaatcatttttacaagtagt 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 459 cttaagacatgacccatgtcctaacccatgagcatgaccttaatcatttttacaagtagt 400
Query: 181 aacccaaataagagctaatagcctatgctccaccttaggttcctttcatgaacacatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aacccaaataagagctaatagcctatgctccaccttaggttcctttcatgaacacatcag 340
Query: 241 acattttcaacacaggaacctttagaagacatgtaagccatctccataccatatcccata 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 339 acattttcaacacaggaacctttagaagacatgtaagccatttccataccatatcccata 280
Query: 301 cctttaagaggcatttataattgctctaaatctttgctttctattttcctcttcactgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 279 cctttaagaggcatttataattgctctaaatctttgctttctattttcctcttcactatt 220
Query: 361 ttcttgcattttgactatc 379
|||||||||||||||||||
Sbjct: 219 ttcttgcattttgactatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
