Query= MSMg01no212_l07.b1 MSMg01no212_l07.b1 CHROMAT_FILE:
MSMg01no212_l07.b1 PHD_FILE: MSMg01no212_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:33 2005
(633 letters)
>mm_chr12_30680606_30681639
Length = 1034
Score = 1195 bits (618), Expect = 0.0
Identities = 630/634 (99%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 1 agaggatcctgctgggacatgtagggacctcactatagtcctcacagagtaccagttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggatcctgctgggacatgtagggacctcactatagtcctcacagagtaccagttctc 260
Query: 61 agtaccctccatctctgtcactgcccacttatcttctccagagtggtgcagctgtggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaccctccatctctgtcactgcccacttatcttctccagagtggtgcagctgtggtct 320
Query: 121 gcacatgagttatcagttctgtctctgggtcactttctctcagggcattcctagatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacatgagttatcagttctgtctctgggtcactttctctcagggcattcctagatccct 380
Query: 181 gagccctatccaccatagctctgggcctccagtagttaccacaggtgcccccagttagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagccctatccaccatagctctgggcctccagtagttaccacaggtgcccccagttagtg 440
Query: 241 gaacttatctattgcacatagctctcttctcagtgaaggacaggtgtggagaagagctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacttatctattgcacatagctctcttctcagtgaaggacaggtgtggagaagagctta 500
Query: 301 tcgaatggtgggagtttgatctgcgagagcactagtaagtttccccccctgcgaaggtcg 360
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 501 tcgaatggtgggagtttgatctgcgagagcactagtaagtttccttccctgggaaggtcg 560
Query: 361 gggcagatgtaaacatagcctcagagaattttccatttgagccttaacagttgaccaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcagatgtaaacatagcctcagagaattttccatttgagccttaacagttgaccaaca 620
Query: 421 ttcctgtctcccagaaaagcaacttctgttccctagtcttattgcagtctcatttttatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcctgtctcccagaaaagcaacttctgttccctagtcttattgcagtctcatttttatt 680
Query: 481 attttgctccaggatggtgttcaggtaacagaaagtggaaaatttcacatcagccccgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attttgctccaggatggtgttcaggtaacagaaagtggaaaatttcacatcagccccgaa 740
Query: 541 ggattcttgaccatcaatgatgttggcactgccgatgcaggtcgctatgagtgtgtagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggattcttgaccatcaatgatgttggcactgccgatgcaggtcgctatgagtgtgtagct 800
Query: 601 cggaac-caattggatatgcctctgtgagcatgg 633
|||||| |||||||||||||||||||||||||||
Sbjct: 801 cggaacacaattggatatgcctctgtgagcatgg 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_l07.g1 MSMg01no212_l07.g1 CHROMAT_FILE:
MSMg01no212_l07.g1 PHD_FILE: MSMg01no212_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:33 2005
(292 letters)
>mm_chr12_30824772_30825463
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 agactccagctcatttatcctaatggctgctgggcctgatgacagcactctggatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agactccagctcatttatcctaatggctgctgggcctgatgacagcactctggatccagc 433
Query: 61 tatgggagtatgatatggtgtggcatgtgatttagaactccctgaaaactcctgagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tatgggagtatgatatggtgtggcatgtgatttagaactccctgaaaactcctgagagag 373
Query: 121 acaaagggcccttcaacattcccactccacagagcagctgtggaaggcacacacggtact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acaaagggcccttcaacattcccactccacagagcagctgtggaaggcacacacggtact 313
Query: 181 tgagcatctgacgtcaaaccgcagcagtcaggtaaggactgtcatttcttctccacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgagcatctgacgtcaaaccgcagcagtcaggtaaggactgtcatttcttctccacaaac 253
Query: 241 aggaatttactggtttccttaactgggcagtgacacctggcttcctatgttt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aggaatttactggtttccttaactgggcagtgacacctggcttcctatgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
