XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTCTT
GCACTTGCGCATAAGGCTTGTTTACTAATTAGGCGCAGTGGAAGCCAGCG
CCATCTTATAATGGTGATTGCTCACGGCACGGCTCTCCACAGTTTTCTTG
ATCATTCTCCCATCTCTGCCTCCTATCTCATCACAGGAACTCTAGGACAA
AAGATGCATTACAACACATATGCTTTTGATGTGGGTTCTAGGAATAAAAC
CCACATTGGTCATGTCTACTTGTCAGATTTTGTTAATTTGTCACAAACTA
GAGTCACTTGGGAAGGGTGACTATGAGTATTCCTAGACAGATGGCTCTGG
GTTTTACAAGTTGAGCAAGGATGAAAAAGAAGCCAGTAAGTAGCATTCCT
CTATAGTCTTTGCTCTAGATCCTGCCTTGAGCTTTGACTTCCCTCAGTGA
TGAAATGCTTCCTGGAAGTGTAAGAAGAAATAAACCTTTTCCTTCAAGAG
TTGCTTGGATTTTAGTGTCTATTAAGCAACAGAAAACAAACTAGAACTAG
AGCAAATGCTTTGCCTGATTTTCATCAATGCTTCCTTTCCAGGCATAGAT
TCTCAGCATACTTTGGTTCTTCAATGTTTCCACACAAAACTTATTCACTG
AATTTAGATTTAGTCTCAAATATCCTGTCATAAAAGCCTTAATAGAACAC
CTGGTACAACTCCTATGACTCATTTTATCATGTGATATN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTGCACTAAACCCAACTGGTCCTGGGCTTTTTTGGTT
GGAAGAATTTTAATGACTACTTCTAGTTCTTTAGGGGTTATGGAACTGTT
TAGTTTATCTGATCCCAATTTAACTTTGGTATTTGGAATCTGTCTAGAAA
ATTGTCCATTTCATCCAGATTTTCCAGTTTTGTTTAATATAGGCTTTTGT
AGTAGGATCTGATGATTTGATTTATTTTTTTCAGTTTCTGTTGTTATATC
TCTCTTATCATTTCTGATTTTGTTAATTTTGATACTGTCTCTGTGCCCCC
TGGTTAGTCTGGATAAGTGCCTATCTGTCTAGTTGATTTTCTTAGAAAAC
CAGCTCCTGCCCCCCCTGATTCTTTGTATAATTCTTTTAATTTCCACCTG
ATTTTAGCCCAGAGTATATTTCCTGCCCTCTCCTTCTCTTGGCTATATTT
GCTTCTTTTGTTCTAGAACTTTCATGCGTGCTATTATTTTGCTACCTGCA
GCTCTCCCTTCTTTCCTTTTTTTGCCCCCCTCAGCTATAAGTTTCCTTCT
TACGACTGCTTTCTTTGTTTCCCTTACCATTGTTTTCCGCCCTTCCCCTT
TTCTTTCCTCCATTTCCCCCCCTATTTTTTCCTTTTCTCCATCTCCTCCT
CGACCTACCTTTCCTTTGCCCCCTTTTTTCTTTTTTG

Query= MSMg01no213_h19.b1 MSMg01no213_h19.b1 CHROMAT_FILE:
MSMg01no213_h19.b1 PHD_FILE: MSMg01no213_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:31 2005
         (700 letters)



>mm_chr12_120790512_120791611
          Length = 1100

 Score = 1131 bits (585), Expect = 0.0
 Identities = 594/597 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactcttgcacttgcgcataaggcttgtttactaattaggcgcagtggaagccag 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gaattcactcttgcacttgtgcataaggcttgtttactaattaggcgcagtggaagccag 538

                                                                       
Query: 65  cgccatcttataatggtgattgctcacggcacggctctccacagttttcttgatcattct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cgccatcttataatggtgattgctcacggcacggctctccacagttttcttgatcattct 478

                                                                       
Query: 125 cccatctctgcctcctatctcatcacaggaactctaggacaaaagatgcattacaacaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cccatctctgcctcctatctcatcacaggaactctaggacaaaagatgcattacaacaca 418

                                                                       
Query: 185 tatgcttttgatgtgggttctaggaataaaacccacattggtcatgtctacttgtcagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tatgcttttgatgtgggttctaggaataaaacccacattggtcatgtctacttgtcagat 358

                                                                       
Query: 245 tttgttaatttgtcacaaactagagtcacttgggaagggtgactatgagtattcctagac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttgttaatttgtcacaaactagagtcacttgggaagggtgactatgagtattcctagac 298

                                                                       
Query: 305 agatggctctgggttttacaagttgagcaaggatgaaaaagaagccagtaagtagcattc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agatggctctgggttttacaagttgagcaaggatgaaaaagaagccagtaagtagcattc 238

                                                                       
Query: 365 ctctatagtctttgctctagatcctgccttgagctttgacttccctcagtgatgaaatgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 237 ctctatagtctttgctctagatcctgccttgagctttgacttccctcagtgataaaatgc 178

                                                                       
Query: 425 ttcctggaagtgtaagaagaaataaaccttttccttcaagagttgcttggattttagtgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ttcctggaagtgtaagaagaaataaaccttttccttcaagagttgcttggattttagtgt 118

                                                                       
Query: 485 ctattaagcaacagaaaacaaactagaactagagcaaatgctttgcctgattttcatcaa 544
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctataaagcaacagaaaacaaactagaactagagcaaatgctttgcctgattttcatcaa 58

                                                                    
Query: 545 tgcttcctttccaggcatagattctcagcatactttggttcttcaatgtttccacac 601
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  tgcttcctttccaggcatagattctcagcatactttggttcttcaatgtttccacac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)