Query= MSMg01no231_c05.b1 MSMg01no231_c05.b1 CHROMAT_FILE:
MSMg01no231_c05.b1 PHD_FILE: MSMg01no231_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:21 2005
(320 letters)
>mm_chr12_57624351_57625070
Length = 720
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%)
Strand = Plus / Plus
Query: 5 gaattctaaaactacacttgtttaagaaacaccgatctgagattcactatttatcctcct 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattctaaaactacacttgtttaagaaacaccgatctgagattcaccatttatcctcct 264
Query: 65 ccatttgaaactaaaatgaggtacacaagaggtacattctattactagagtttcagactg 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 ccatttgaaactaaaatgaggtacacaagagatacattctattactagagtttcagactg 324
Query: 125 ctagaaagttagttattttcacccgagaaaacactgaactgtctttttctgccccatcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctagaaagttagttattttcacccgagaaaacactgaactgtctttttctgccccatcaa 384
Query: 185 aactgctgtggtaacttttgggttggatttttcttttgtaaagttttaatgatttgttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactgctgtggtaacttttgggttggatttttcttttgtaaagttttaatgatttgttta 444
Query: 245 ttttaattttatatgcactggtatttagcctgcaactatgtgtgtgagagttggcttcca 304
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 tttttattttatatgcactggtatttcgcctgcaactatgtgtgtgagagttggcttcca 504
Query: 305 tgaaactaggtggca 319
|||||||||||||||
Sbjct: 505 tgaaactaggtggca 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_c05.g1 MSMg01no231_c05.g1 CHROMAT_FILE:
MSMg01no231_c05.g1 PHD_FILE: MSMg01no231_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:21 2005
(293 letters)
>mm_chr12_57737986_57738677
Length = 692
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 ttgcacgttgtaggctgagctctagggggcagcaaagacacaggtttctctccataagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 489 ttgcacgttgtaggctgagctctagggggcagcaaagacacaggtttct-ttgataagaa 431
Query: 61 ctccacagtcacaaatgcttagaaacctttctaagaattagagtttagaaaagtgtaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctccacagtcacaaatgcttagaaacctttctaagaattagagtttagaaaagtgtaatg 371
Query: 121 tcaaattagttcagtcctgtactcttatataacaggaggaggctttgtaagctgaaacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcaaattagttcagtcctgtactcttatataacaggaggaggctttgtaagctgaaacga 311
Query: 181 cttcctaagatcgtcagttagaagatagtgcaggccgccccctcaacccccacctactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttcctaagatcgtcagttagaagatagtgcaggccgccccctcaacccccacctactcc 251
Query: 241 acattctttaaatgtgttttcctgcctttagtcaaggtttagagacaatc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acattctttaaatgtgttttcctgcctttagtcaaggtttagagacaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
