Query= MSMg01no232_p10.b1 MSMg01no232_p10.b1 CHROMAT_FILE:
MSMg01no232_p10.b1 PHD_FILE: MSMg01no232_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:35 2005
(325 letters)
>mm_chr12_96253471_96254191
Length = 721
Score = 540 bits (279), Expect = e-158
Identities = 309/321 (96%), Gaps = 6/321 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaataaaaattatttgataattcataaacacaagaactctttcattgaagcaaa 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaagtcaataaaaattatttgataattcataaacacaagaactctttcattgaagcaaa 460
Query: 64 gtgtaggacatttgctttcttacagtttaactggctggttgtgtgactttgagtcagact 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 459 gtgtaggacatttgctttcttacagtttaactggctggttgtgtgactttgagttagact 400
Query: 124 catgttcttaaaaaacaaaaagttgagacagtagacaagaaactgccctctaaagttcac 183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 399 catgttcttaaaaaacaaaaagttgagacagtagacaagcaactgccctctaaagttcac 340
Query: 184 agatgagtcatggagcatctctggactttatttgtttctttacacatgtgagcatcttca 243
|||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 339 agatgagtcatggaacatctttggacttt----gtttctttacacatgtgagcgtcttca 284
Query: 244 aatctatgctcacaaaactggcaatcagcattgttacttt-aaagcacttgatttgttaa 302
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 283 aatctatgctcacaaaactggcaatcagcattgtta-tttcaaagcacttgatttgttaa 225
Query: 303 aaagaactttgttcatttttc 323
|||||||||||||||||||||
Sbjct: 224 aaagaactttgttcatttttc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 721
Length adjustment: 9
Effective length of query: 316
Effective length of database: 712
Effective search space: 224992
Effective search space used: 224992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_p10.g1 MSMg01no232_p10.g1 CHROMAT_FILE:
MSMg01no232_p10.g1 PHD_FILE: MSMg01no232_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:35 2005
(290 letters)
>mm_chr12_96108185_96108874
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 atttagggcattttccaccaaataaatttcttaagggctttgtgtataccagacagatga 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atttagggcattttccaccaaataaatttcttaagggctttgtgtatagaagacagatga 260
Query: 61 tcagatgttttattcagcaaatgcatgtgtagcagtcttttaagcttgaagtgcctgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagatgttttattcagcaaatgcatgtgtagcagtcttttaagcttgaagtgcctgata 320
Query: 121 atgacaggagggtacaaaggaatgcaagttccccacttttcagaaaactgaaaagtatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgacaggagggtacaaaggaatgcaagttccccacttttcagaaaactgaaaagtatgt 380
Query: 181 gagtaattttatgatccgcccaagtctgtcactggtggatgcttacagcatgaccaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtaattttatgatccgcccaagtctgtcactggtggatgcttacagcatgaccaacat 440
Query: 241 tatctgcctaaaacatgcttatctactttattttgtatttaaaaaa 286
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tatctgcctaaaacatgcttatctactttattttttatttaaaaaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
