Query= MSMg01no233_i12.b1 MSMg01no233_i12.b1 CHROMAT_FILE:
MSMg01no233_i12.b1 PHD_FILE: MSMg01no233_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(318 letters)
>mm_chr12_102200685_102201402
Length = 718
Score = 526 bits (272), Expect = e-154
Identities = 302/312 (96%)
Strand = Plus / Minus
Query: 5 gaattcccaacagccgtgtgggctgcccctggagactgtgtagaacagttatgacacctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattcccaacagccgtgtgggctgcccctggagactgtgtagaacagttatgacacctt 457
Query: 65 tgccctctccacacttggaacactttggtgtggcatgggattgactttgctgctgtggtg 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgccctctccatacttggaacactttggtgtggcatgggattgactttgctgctgtggtg 397
Query: 125 atgttgacggagcagtgtggagaccatcatgggagtggcagagacaccgtcagtcccctc 184
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 396 atgttgacggagcagtgtggagaccgtcatgggagtggcagggacaccgtcagtcccctc 337
Query: 185 taaaagctccctgtcggctgagaagcaggtgagcaagcctgcagttaggacatgatatcc 244
| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 336 tgaaagctccctgtcgtctgagaagcaggtgagcaagcctgcagctaggacgtgatatcc 277
Query: 245 acgtgttccgcaggaaccccacaggagggcccctccctcagagcttggtgagggaccagg 304
|||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 276 acgtgttcggcaggaaccccacaggagggcccctccctcagagcgtggcgagggaccagg 217
Query: 305 aatgctttcctg 316
||||||||||||
Sbjct: 216 aatgctttcctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_i12.g1 MSMg01no233_i12.g1 CHROMAT_FILE:
MSMg01no233_i12.g1 PHD_FILE: MSMg01no233_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(286 letters)
>mm_chr12_102054996_102055681
Length = 686
Score = 466 bits (241), Expect = e-136
Identities = 274/287 (95%), Gaps = 6/287 (2%)
Strand = Plus / Plus
Query: 1 ctagaactgaataaagcaaaggggtggctccatgaaggtggaatttcagttatctaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagaactgaataaagcaaaggggtggctccatgaaggtggaatttcagttatctaccat 260
Query: 61 aagagtggaccagatctgtttactctggagttggggtgtgtcagactctgctgagagggt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aagagtggaccagatctgtttactctggagttggggtgtgtcagattctgctgagagggt 320
Query: 121 ggttgtctttggggcccagtgtagagagaatagcttatgtattgtacatattgcattgcc 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttgtctttggggctcagtgtagagagaatagcttatgtattgtacatattgcattgcc 380
Query: 181 acaga-tcctctgggcccctttgtcttcgtggagctggtctctagtcgcgggtgggcggg 239
||||| || |||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 381 acagactc-tctgggcccctttgtcttcgtggaacgggtctctagtctcgggtgggc--- 436
Query: 240 caaagtgtcggatgaattgacagacagatgcacacaggagaggttgt 286
|||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 437 -aaagcgtcggatgaattgatagacagatgcacacaggagaggttgt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
