Query= MSMg01no235_a04.b1 MSMg01no235_a04.b1 CHROMAT_FILE:
MSMg01no235_a04.b1 PHD_FILE: MSMg01no235_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:13 2005
(314 letters)
>mm_chr12_72463167_72463880
Length = 714
Score = 524 bits (271), Expect = e-153
Identities = 301/311 (96%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 5 gaattc-catacctaaaataaataaataaatattttaaagaagagttgtctgtgtcaggt 63
|||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 204 gaattcacatacctaaaataaataaataaatctttttaagaagagttgtctgtgtcaggt 263
Query: 64 aatctgatcacagcaatgcaacataactaatacttacatgaagtgcacggtgaccccgct 123
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 aatctgatcacagcaatgaaacatagctaatacttacatgaagtgcacggtgaccccgct 323
Query: 124 gccagacgacccgcagaagcctgttcctttctgtatgctctccaccaggctctgtcccaa 183
| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcagacaacccgcagaagcctcttcctttctgtatgctctccaccaggctctgtcccaa 383
Query: 184 cagttacagtggcttttgtctgacacgagtgttctcacgagttcctttctctcgagcagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagttacagtggcttttgtctgacacgagtgttctcacgagttcctttctctcgagcagt 443
Query: 244 ttattctgttcttgcttcactaattcctgtcctggagttctgactgcttcccctgcgtca 303
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 ttattctgttcatgcttcactaattcctgtcctggagttccgactgcttcccctgcgtca 503
Query: 304 ccccagacagg 314
|||||||||||
Sbjct: 504 ccccagacagg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_a04.g1 MSMg01no235_a04.g1 CHROMAT_FILE:
MSMg01no235_a04.g1 PHD_FILE: MSMg01no235_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:13 2005
(287 letters)
>mm_chr12_72613199_72613885
Length = 687
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Minus
Query: 1 tttcccaatgaggggaaaggggtgggcaaagagacttgatgaccttcttttcagacaaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttcccaatgagggggaaggggtgggcaaagagacttgatgaccttcttttcagacaaat 428
Query: 61 agatctgtacctataacctttctggagccaaaaaggtcaagggtgaaagacccagaggaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agatctgtacctataacttttctggagccaaaaaggtcaagggtgaaagacccagaggaa 368
Query: 121 cagaacaaatcaaggggtatagactaattaaagactacagcaatgtgcatgctgtataga 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cagatcaaatcaaggggtatagactaattaaagactacagcaatgtgcatgctgtataga 308
Query: 181 cactattgtttccaagacataagaaacagcattatatgtgacatcaaaggaagccagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cactattgtttccaagacataagaaacagcattatatgtgacatcaaaggaagccagatt 248
Query: 241 tctgtgtgttattttgttgctgaaggatattttcgaaacaaagggtt 287
|||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 247 tctgtgtgttattttgttgctgaaggatgtttttgaaacaaagggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
