Query= MSMg01no236_a18.b1 MSMg01no236_a18.b1 CHROMAT_FILE:
MSMg01no236_a18.b1 PHD_FILE: MSMg01no236_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:31 2005
(664 letters)
>mm_chr12_36525501_36526564
Length = 1064
Score = 1245 bits (644), Expect = 0.0
Identities = 656/660 (99%)
Strand = Plus / Minus
Query: 5 gaattctgttaatgcagaggaggttctgctattttggggtgtatcttttgtcttctttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gaattctgttaatgcagaggaggttctgctattttggggtgtatcttttgtcttctttgt 805
Query: 65 gtatgtttgtgctttctgaactagctgctaagagcactggtagcatagatggtatcacaa 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtatgtttgtgttttctgaactagctgctaagagcactggtagcatagatggtatcacaa 745
Query: 125 tttctcagaatgaagaccgaatgagaagttcacccaagtgcaggccctggtgcccaagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttctcagaatgaagaccgaatgagaagttcacccaagtgcaggccctggtgcccaagac 685
Query: 185 ccagttagtgtggaaacatgagtgcttgctgactttgtgatgtctgccaccatttccttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccagttagtgtggaaacatgagtgcttgctgactttgtgatgtctgccaccatttccttc 625
Query: 245 ctcttcaaagtgtttgcactcattgaactacttaaccacaaatgtcaactcagcttgtga 304
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcttcaaagtgtttgtactcattgaactacttaaccacaaatgtcaactcagcttgtga 565
Query: 305 ggcagggggattcctagaaatgagtgtgacccaactagacaatgcaaatacatcaattat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggcagggggattcctagaaatgagtgtgacccaactagacaatgcaaatacatcaattat 505
Query: 365 ttcctcttcttcaccctgtcctggagaggaagcagctggggcaaccaggctttcctcaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcctcttcttcaccctgtcctggagaggaagcagctggggcaaccaggctttcctcaca 445
Query: 425 tctccttttcatttgaagaacaccgttgcttcatcctgtatgcctgtaggcttattgctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctccttttcatttgaagaacaccgttgcttcatcctgtatgcctgtaggcttattgctg 385
Query: 485 cagtgctcttacacatgtgggcctgaacttcagtgcattatttctgcctgtggtgaatac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagtgctcttacacatgtgggcctgaacttcagtgcattatttctgcctgtggtgaatac 325
Query: 545 atataaactggagttgatggtcttattcatcttatgtttctaggactcatgctgtccagc 604
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atataaactggacttgatggtcttattcatcttatgtttctaggactcatgctgtccagc 265
Query: 605 tctgtgaaggatttgagaaatgcgttagattctatgtctttagtgagagaaatccttggg 664
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctgtgaaggatttgagaaatgcattagattctatgtctttagtgagagaaatccttggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_a18.g1 MSMg01no236_a18.g1 CHROMAT_FILE:
MSMg01no236_a18.g1 PHD_FILE: MSMg01no236_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:31 2005
(665 letters)
>mm_chr12_36432037_36433101
Length = 1065
Score = 1156 bits (598), Expect = 0.0
Identities = 649/666 (97%), Gaps = 2/666 (0%)
Strand = Plus / Plus
Query: 1 ccaggggagagggtgttggtgaaagagtcgggaggggattcctgtatggacaactatgtc 60
||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 201 ccaggtgagagggtgttggtgaaagtgttgggaggggattcctgtatggacaactatgtc 260
Query: 61 tggtgaactcactagtataagacatcagatattctgacagaagtcacaagctaaaaggaa 120
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtgaattcactagtataagacctcagatattctgacagaagtcacaagctaaaaggaa 320
Query: 121 aggaagctgtggcttgggatatgttcacgagttatttaaacattacggagagcattattg 180
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 321 aggaagttgtggcttgggatatgttcatgagttatttaaacattacggagagcatcattg 380
Query: 181 tccattgttaaggaaccatttcgttgtccagatcctaccatattcagacgttatgtgcag 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccattgttaaggaaccatttcattgtccagatcctaccatattcagacgttatgtgcag 440
Query: 241 aaatgtgcatgccttt-tccacaccccaccagcaatgctgtatggtggatattagcactc 299
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgtgcatgc-tttatccacaccccaccagcaatgctgtatggtggatattagcactc 499
Query: 300 caattataagtaaaattcctggcatatgtagggttgatgcagatctttgcccattctgta 359
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 500 caattataagtaaaattcctggcagatgtagggttgatgcagatctttacccattctgta 559
Query: 360 ggctgctgttttgccctattgatgatgtcctttgtcctacaggagcctctcagttttatg 419
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 ggctgctgttttgtcctattgatgatgtcctttgccctacaggagcctctcagttttatg 619
Query: 420 aggttccatgtactaactgttgatcttagtgcatgagctgttggtgttctgttcaggaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggttccatgtactaactgttgatcttagtgcatgagctgttggtgttctgttcaggaag 679
Query: 480 ctgtcttctgtaccaatgagttgaaggctattcctcccactttctcttctattagattta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgtcttctgtaccaatgagttgaaggctattcctcccactttctcttctattagattta 739
Query: 540 gcatattcagttttatgttgcagtctttgatccacttggacttgagatttttgctgggtg 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcatatccagttttatgttgcagtctttgatccacttggacttgagatttttgctgggtg 799
Query: 600 ataaatccagatttatttgcattcttcaacatgcagacatccagttagaccagcactgat 659
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 800 ataaatccagatttatttgcattcttcgacatgcagacatccagttagaccagcactgat 859
Query: 660 tgctga 665
||||||
Sbjct: 860 tgctga 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
