CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTATTGAGAATGTAAAATATTTACTCCACTTTCAAACGCATGGA
ACCATGTGTGTGTGAGCATTCCTGTGTATACATTTGTTTGCGTGTGATGC
CCATATATTTGTATATCATATATATGAACAATCACATATATGTGTATAAA
TATCTACTATGTCCATTCACATTTCAAGGTGTTTTATGGTAATATTATGA
ATATACATATATACACGTAAATATTATATATGTGCACATATATACATGCC
TTTAGGCTATAAAATTATATCTACTTATTTCAAAATGGAATTTTAACAAT
CCATTATTAATGAACATGAATACATTACGCGCAGACAAATTAGACAAAAT
AACTCCTCATGGCATCTATAAATCACCTACATTCTGTTCAAATCTTGGGG
GTTTTTTCTTCCTCTTTTTTTCCCCTTCATTTCCTGGTTCCTTGTCTTTC
TCTAATATGTTAATTAGTTTATAATTATGTAATATGTAATTAATATTTAA
GATATTCCCCCAAAGGTCATTATAAGATTAACAGAGTTACTTTTAATGAT
ACATTAAATAGCTATTTAAATAAAATTCACTCATGTATAGTCATTTAAAT
TGTTCCTTGTTGGAAAAAAAGCTATATTATTAAAATTTGTGACTCTAAAA
GGGAATTTTAAGGCAACCTGATAGAAGTAAAACTAGAA

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATATTGAATAAAAGTCAATATTCAT
GTTTCCTAAGAATCCGCATTCACCCCGAAGTCGTTCTAAGTAAATCACAT
AACAATTTTGTTTTTGTGAATGAGTAAAAGTGGAAATGAGCTAAATAAAT
ATGCAAAAATAATCATTTGACTGGTCATCTGGTGAAAGAGCAGAGCATTT
CCTAGAGGACAGTGGTTACACATGGACCAGCTGTCAGGGGCCTAATCACA
GGCAATGGCAGTATTGTACCTGGACAAAGTGATGACTTGCTCTGAAATGT
TATAATGAAATAATATATACTATTTCACGCTTAGTTATCATTACTGGCTA
ACTAACATTCTTCTCAGTCCAAGACTTTAAGCACTAAAAAAAAAAAAATA
CGCTAAGAATATGGAGAAGCAAACATCTTGTCTATTTTAGTCAGGCAGCC
TTTAATGACAAAAACAAAGATAGGATGTTGTAAACAGCTTGGATTGCCTA
CCTTTGTATTTTAGTATTTCAATGCAGGAACATTTATCCAAAGGCTTGTT
CCTTTATTGAAAGGTAATGGTGGGAACCAACTTAAGAACATGTAAAATGC
AAGATTTTTTAATCAATGCAAAGCTATTAATTTAACCAACCCTTCCTGTA
ATAATATTGAGGCAGACTGTCTGCCTGTTTCTACATTAN

Query= MSMg01no237_a16.b1 MSMg01no237_a16.b1 CHROMAT_FILE:
MSMg01no237_a16.b1 PHD_FILE: MSMg01no237_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:45 2005
         (355 letters)



>mm_chr12_40050272_40051026
          Length = 755

 Score =  687 bits (355), Expect = 0.0
 Identities = 355/355 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacaaattagacaaaataactcctcatggcatctataaatcacctacattctgttcaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gacaaattagacaaaataactcctcatggcatctataaatcacctacattctgttcaaat 496

                                                                       
Query: 61  cttgggggttttttcttcctctttttttccccttcatttcctggttccttgtctttctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cttgggggttttttcttcctctttttttccccttcatttcctggttccttgtctttctct 436

                                                                       
Query: 121 aatatgttaattagtttataattatgtaatatgtaattaatatttaagatattcccccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatatgttaattagtttataattatgtaatatgtaattaatatttaagatattcccccaa 376

                                                                       
Query: 181 aggtcattataagattaacagagttacttttaatgatacattaaatagctatttaaataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aggtcattataagattaacagagttacttttaatgatacattaaatagctatttaaataa 316

                                                                       
Query: 241 aattcactcatgtatagtcatttaaattgttccttgttggaaaaaaagctatattattaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aattcactcatgtatagtcatttaaattgttccttgttggaaaaaaagctatattattaa 256

                                                                  
Query: 301 aatttgtgactctaaaagggaattttaaggcaacctgatagaagtaaaactagaa 355
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatttgtgactctaaaagggaattttaaggcaacctgatagaagtaaaactagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space:   258116
Effective search space used:   258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no237_a16.g1 MSMg01no237_a16.g1 CHROMAT_FILE:
MSMg01no237_a16.g1 PHD_FILE: MSMg01no237_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:45 2005
         (289 letters)



>mm_chr12_39899110_39899798
          Length = 689

 Score =  520 bits (269), Expect = e-152
 Identities = 284/289 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atattgaataaaagtcaatattcatgtttcctaagaatccgcattcaccccgaagtcgtt 60
           ||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||
Sbjct: 201 atattgaataaaagtcaatgttcatgtttcctaagaatccgcattcagaacgaagtcgtt 260

                                                                       
Query: 61  ctaagtaaatcacataacaattttgtttttgtgaatgagtaaaagtggaaatgagctaaa 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaggtaaatcacataacaattttgtttttgtgaatgagtaaaagtggaaatgagctaaa 320

                                                                       
Query: 121 taaatatgcaaaaataatcatttgactggtcatctggtgaaagagcagagcatttcctag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatatgcaaaaataatcatttgactggtcatctggtgaaagagcagagcatttcctag 380

                                                                       
Query: 181 aggacagtggttacacatggaccagctgtcaggggcctaatcacaggcaatggcagtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggacagtggttacacatggaccagctgtcaggggcctaatcacaggcaatggcagtatt 440

                                                            
Query: 241 gtacctggacaaagtgatgacttgctctgaaatgttataatgaaataat 289
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtacctggacaaagtgatgacttgctctgaaatgttataatgaaataat 489


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space:   190400
Effective search space used:   190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)