Query= MSMg01no237_m09.b1 MSMg01no237_m09.b1 CHROMAT_FILE:
MSMg01no237_m09.b1 PHD_FILE: MSMg01no237_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:41 2005
(248 letters)
>mm_chr12_33068851_33069498
Length = 648
Score = 404 bits (209), Expect = e-117
Identities = 239/249 (95%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 1 aaatcagagccaattcattgtctttatagctagcatctaaaactatttgtgctc-atggc 59
|||||||||||||||||||||||||||| ||| |||||||||||| |||| | |||||
Sbjct: 344 aaatcagagccaattcattgtctttatatctaacatctaaaactaagggtgc-caatggc 286
Query: 60 tccaatatgacagaatttttgcacagacttcacagaatctaactgcattttgactctgtg 119
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tccaacatgacggaatttttgcacagacttcacagaatctaactgcattttgactctgtg 226
Query: 120 gccatgggagaaaaatgctctacagcagcagttctcagcctgtgggtctcaaccactctg 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 225 gccatgggagaaaaatgctctacagcagcagttctcagcctgagggtctcaaccactctg 166
Query: 180 aaagttgactaaccctctcacaggggtcgactatcagacatcctgcatatcaggtattta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aaagttgactaaccctctcacaggggtcgactatcagacatcctgcatatcaggtattta 106
Query: 240 catttctat 248
|||||||||
Sbjct: 105 catttctat 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_m09.g1 MSMg01no237_m09.g1 CHROMAT_FILE:
MSMg01no237_m09.g1 PHD_FILE: MSMg01no237_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:41 2005
(166 letters)
>mm_chr12_32971509_32972074
Length = 566
Score = 267 bits (138), Expect = 3e-76
Identities = 147/150 (98%)
Strand = Plus / Plus
Query: 1 tatagaacagctgtgtttccttgataggaacagtagatcatttgcccgctgggctgggct 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tatagaacagctgtgtttccttgataggaacagtagatcatttgtgggctgggctgggct 260
Query: 61 ggcaaaaaacaaccaagttctgaattagtaaagcttatatttctcctgctgagcagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaaaaaacaaccaagttctgaattagtaaagcttatatttctcctgctgagcagagag 320
Query: 121 acagcttgttaggatggttctcaagggtgg 150
||||||||||||||||||||||||||||||
Sbjct: 321 acagcttgttaggatggttctcaagggtgg 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
