Query= MSMg01no262_c05.b1 MSMg01no262_c05.b1 CHROMAT_FILE:
MSMg01no262_c05.b1 PHD_FILE: MSMg01no262_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:42 2005
(463 letters)
>mm_chr12_51649689_51650549
Length = 861
Score = 785 bits (406), Expect = 0.0
Identities = 445/460 (96%), Gaps = 6/460 (1%)
Strand = Plus / Minus
Query: 6 gaattctcacctgtccc--atacacgtctagaaactcaacctggagaattcatattctta 63
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 489 gaattctcacctgtcccagata---gtctagaaactcaacctggagaattcatattctta 433
Query: 64 ttacacttatggttgtttggcctttggcaaatgtttcaacgtttgcctagggaaaacata 123
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttacac-tatggttgtttggcctttggcaaatgtttcaacgtttgcctagggaaaacata 374
Query: 124 agtaactgtggcagcatcaaatacatattttcagttctaagtggttacatggccagtctt 183
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 373 agtaactgtgccagcatcaaatacatattttcagttttaagtggttacatggccagtctt 314
Query: 184 ccagttaatagggacttcacattttaaaaatgacctagggttttctatgtagagttgact 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 313 ccagttaatagggacttcacattttaaaaatgacttagggttttctatgtagagttgact 254
Query: 244 cccgagtaaaggagcgtttttacatagaatactctgaagtttctagagactttttaagtt 303
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 253 cccgagtaaaggagcgtttttacatagattactctgaagtttctagagtctttttaagtt 194
Query: 304 gtctgagactttcatatatgcatgtaatgtgttttgatcaaatccaccccctgtccactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtctgagactttcatatatgcatgtaatgtgttttgatcaaatccaccccctgtccactc 134
Query: 364 ccctcatttcttccctatctcaccaccatgtctccttgccaacttgatgtggccttgttt 423
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 133 ccctcatttcttccctatcttaccaccatgtctccttgccaacttgatgtggtcttgttt 74
Query: 424 tatattccagcatgcatgcccactggagaaaggccatcag 463
|| |||||||||||||||||||| ||||||||||||||||
Sbjct: 73 taaattccagcatgcatgcccacgggagaaaggccatcag 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 861
Length adjustment: 10
Effective length of query: 453
Effective length of database: 851
Effective search space: 385503
Effective search space used: 385503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_c05.g1 MSMg01no262_c05.g1 CHROMAT_FILE:
MSMg01no262_c05.g1 PHD_FILE: MSMg01no262_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:42 2005
(587 letters)
>mm_chr12_51487132_51488118
Length = 987
Score = 1089 bits (563), Expect = 0.0
Identities = 581/587 (98%)
Strand = Plus / Plus
Query: 1 cagggacaagagcagcactgaacagatgatattcatggagtctgttttttgataaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggacaagagcagcactgaacagatgatattcatggagtctgttttttgataaacaat 260
Query: 61 ctcagatcactgtaagcaggatggtccactggcttgtttgggtcttaggtagagagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagatcactgtaagcaggatggtccactggcttgtttgggtcttaggtagagagagca 320
Query: 121 agcagttgatgctgttggtcacagcactgaggtaggtactccatcttgagtactgagatg 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 321 agcagttgatgctgttggtcacagcactgaggtaggtactccatcttcagtactaagatg 380
Query: 181 aaatcaagcaaacacaacctcgtgtaaaacatcttacgatgtgatctataacttctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcaagcaaacacaacctcgtgtaaaacatcttacgatgtgatctataacttctgaat 440
Query: 241 tctgaaaagtctgtgctaggtggcactggtgatcatagttcctgatttaggggacgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgaaaagtctgtgctaggtggcactggtgatcatagttcctgatttaggggacgtttt 500
Query: 301 tgagatctatattgtggcatgtatacgtgactaagaatatttgcaccccctttcatctat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tgagatctatattgtggcatgtatacgtgactaagaatatttgcagcccctttcatctat 560
Query: 361 cagcacaccttgttagcaaggagataagcaatggcatgttaaaaaaggtctacaaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagcacaccttgttagcaaggagataagcaatggcatgttaaaaaaggtctacaaataaa 620
Query: 421 aattttacattattaatgtatctattttactgtgcattaccaaccattaaatttcaatta 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 aattttacattattaatgtatctattttactgtgcaataccaaccattaaatttcaatta 680
Query: 481 tcaagtcagatcagtggtactcctagctgtcactaccaagcctgcctccttcctgctgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaagtcagatcagtggtactcctagctgtcactaccaagcctgcctccttcctgctgtg 740
Query: 541 ttcttagtaaactatatgtcctattttgatctaaaaacgaacgaaca 587
|||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 741 ttcttagtaaactatatgtcctattttgatctaaaaacaaacaaaca 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
