Query= MSMg01no272_n12.b1 MSMg01no272_n12.b1 CHROMAT_FILE:
MSMg01no272_n12.b1 PHD_FILE: MSMg01no272_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:05 2005
(294 letters)
>mm_chr12_13182451_13183144
Length = 694
Score = 557 bits (288), Expect = e-163
Identities = 291/292 (99%)
Strand = Plus / Minus
Query: 1 atgagtgcttgtccaggggtggggatagagaggccttctagtaaatattcaggccctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atgagtgcttgtccaggggtggggatagagaggccttctagtaaatattcaggccctttg 411
Query: 61 gggctgacaaggtgggaagtttcactacagggagagctgtgtgtgtttccagctgtagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 410 gggctgacaaggtgggaagtttcactacagggagagctgtgtgtgtttccagctgaagca 351
Query: 121 aaactcactggatgcagcaaatgatgtgtgaatcatgtctcgacagatacaacttcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaactcactggatgcagcaaatgatgtgtgaatcatgtctcgacagatacaacttcatgc 291
Query: 181 atttgccagagtggtttgtgtgactttacagatatgctaaaacctactgaacataattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atttgccagagtggtttgtgtgactttacagatatgctaaaacctactgaacataattga 231
Query: 241 cacatgaatcatattctaataagatattttacacacacacacacacacacac 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cacatgaatcatattctaataagatattttacacacacacacacacacacac 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no272_n12.g1 MSMg01no272_n12.g1 CHROMAT_FILE:
MSMg01no272_n12.g1 PHD_FILE: MSMg01no272_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:05 2005
(289 letters)
>mm_chr12_13015731_13016422
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 287/290 (98%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 1 tcttgccttgccttcaaacaacttgttatcagaataaaactcttagctttaatgctttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgccttgccttcaaacaacttgttatcagaataaaactcttagctttaatgctttgg 260
Query: 61 tgagaaccccacacaattcccctgccc---cccccccttcatgtgtttggaccaagcacc 117
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgagaaccccacacaattcccctgccctcccccccccttcatgtgtttggaccaagcacc 320
Query: 118 aagtgtcatatatagactttcaattcatagattcagcagtatctttaaattgcatggaag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtgtcatatatagactttcaattcatagattcagcagtatctttaaattgcatggaag 380
Query: 178 atactgtcttcattgtttccctgaagtcttcacggagtagatgtcagctgacttacacat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactgtcttcattgtttccctgaagtcttcacggagtagatgtcagctgacttacacat 440
Query: 238 ggtttatcacacagtgagtctccccaggaattccacctgccttgtctatc 287
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttatcacacagtgagtctccccaggaattccacctgccttgtctatc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 692
Length adjustment: 9
Effective length of query: 280
Effective length of database: 683
Effective search space: 191240
Effective search space used: 191240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
