Query= MSMg01no273_a12.b1 MSMg01no273_a12.b1 CHROMAT_FILE:
MSMg01no273_a12.b1 PHD_FILE: MSMg01no273_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:20 2005
(313 letters)
>mm_chr12_88366658_88367370
Length = 713
Score = 549 bits (284), Expect = e-161
Identities = 304/312 (97%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 5 gaattccaggacagccagggctttacagagaaaccctgtctcgaa--ccccccctcccaa 62
|||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 201 gaattccaggacagccagggctatacagagaaaccctgtctcgaaaccccccccccccaa 260
Query: 63 aaaaa--gcatggttggcaggtctttggtgaagcctgagacccacttgaggagtgtggtc 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaagcatggttggcaggtctttggtgaagcctgagacccacttgaggagtgtggtc 320
Query: 121 ctgacagaatggaccggacttatcgcgtttctgtgggcctcctgggtggggttctggtca 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ctgacagaatggaccggacttatcgcgttcctgtgggcctcctgggtggggttctggtca 380
Query: 181 atttataaacctttcttttgttgaagaaggagtcagcactgagccatgcccggatatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttataaacctttcttttgttgaagaaggagtcagcactgagccatgcccggatatggt 440
Query: 241 cctagggtgtggtacagtgctaccttggtgaggttgaatgtgtttccttgcttctgacta 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagggtgtggcacagtgctaccttggtgaggttgaatgtgtttccttgcttctgacta 500
Query: 301 gctgggctagga 312
||||||||||||
Sbjct: 501 gctgggctagga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_a12.g1 MSMg01no273_a12.g1 CHROMAT_FILE:
MSMg01no273_a12.g1 PHD_FILE: MSMg01no273_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:20 2005
(286 letters)
>mm_chr12_88515144_88515829
Length = 686
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Minus
Query: 1 tgttgtgtagatggccaagtaccaagctccacagcgacctgaggacacagttatgatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgttgtgtagatggccaagtaccaagctccacagcgacctgaggacacagttatgatcca 425
Query: 61 gtctgagcacactggggctatagatgttctttcagcggacttggaatctgcagatcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtctgagcacactggggctatagatgttctttcagcggacttggaatctgcagatcttct 365
Query: 121 gggggaccacaggaaaggtgaggcctttggaagcagagaaaatagtttcttcatggccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 364 gggggaccacaggaaaggtgaggcctttggaagcagagaaaatagtttcttgatggccag 305
Query: 181 tagatgcttgaaggattcaagccagaaggaaggaaagaaaacaagttggtggaagccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 304 tagatgcttgaaggattcaagccagaaggaaggaaagaaaacaagttggtggaggccctt 245
Query: 241 agaaagaatgttgtgtgttaacctagcaaaatgctgggtcaggg 284
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 244 agaaagaatgttgtgtgttaacctagcaaaatgctgggccaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
