Query= MSMg01no275_h05.b1 MSMg01no275_h05.b1 CHROMAT_FILE:
MSMg01no275_h05.b1 PHD_FILE: MSMg01no275_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:11 2005
(237 letters)
>mm_chr12_56718803_56719439
Length = 637
Score = 412 bits (213), Expect = e-120
Identities = 231/241 (95%), Gaps = 8/241 (3%)
Strand = Plus / Minus
Query: 1 aaaagtcacaggctgagtggagaacatatgcttcgtaagggagccggcatttcctgggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaagtcacaggctgagtggagaacatatgcttcgtaagggagccggcatttcctgggta 378
Query: 61 ggctttctgccttccctaaaacttccattgacaacaaattccaaagcttccggcatactt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggctttctgccctccctaaaacttccattgacaacaaattccaaagcttccggcatactt 318
Query: 121 taaaagaaactgtctttagggtgagggcttttccccctgttttaggagataagtcaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taaaagaaactgtctttagggtgagggcttttccccctgttttaggagataagtcaataa 258
Query: 181 gcttatctcct----atattttttaaacttaagagaagaataatagtaaaaatctttaat 236
||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcttatctcctaaacaca----ttaaacttaagagaagaataatagtaaaaatctttaat 202
Query: 237 a 237
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no275_h05.g1 MSMg01no275_h05.g1 CHROMAT_FILE:
MSMg01no275_h05.g1 PHD_FILE: MSMg01no275_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:11 2005
(247 letters)
>mm_chr12_56562357_56563003
Length = 647
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%)
Strand = Plus / Plus
Query: 1 tcctatccagctgtgctgaggtcatttgaggcagctgggatccctggctccctaggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tcctatccagctgtgctgaggtcatttgaggcagctgggatccctggctgaataggtgaa 260
Query: 61 ggtcatctgtaaagacacacagtccatggaagcccttaggaacatgactatgtcttgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcatctgtaaagacacacagtccatggaagcccttaggaacatgactatgtcttgact 320
Query: 121 atggagacaggtactcaagacccctctgtgggttcctctgacacacagctaaaccagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggagacaggtactcaagacccctctgtgggttcctctgacacacagctaaaccagtac 380
Query: 181 agtggcctaagtggcccttctgctttggggacccaacggggcataaagaagctcaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggcctaagtggcccttctgctttggggacccaacggggcataaagaagctcaagggt 440
Query: 241 gtcctta 247
|||||||
Sbjct: 441 gtcctta 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
