MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-277I18
Chromosome	12 (Build37)
Map Location	31,830,517 - 31,830,805
singlet/doublet	singlet
Overlap gene	LOC100043065
Upstream gene	Sntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781
Downstream gene	LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sntg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268534 MGI:1919541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211986 MGI:2387176
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Acp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11431 MGI:87881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3yl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24057 MGI:1346118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 11 Proteins pseudo : _no_value

name	9030611O19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104943 MGI:1918813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG629667 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629667 MGI:3644833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100043068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 6 Proteins

name	Lamb1-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16777 MGI:96743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13382 MGI:107450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668786 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs pseudo : _no_value

name	Slc26a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13487 MGI:107181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104836 MGI:2144842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc26a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23985 MGI:1346029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Bcap29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12033 MGI:101917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dus4l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71916 MGI:1919166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043081 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Gpr22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73010 MGI:1920260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73389 MGI:894659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Prkar2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19088 MGI:97760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sntg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803313 GeneID:268534 MGI:1919541
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntrophin, gamma 2 transcript_id : NM_172951.2

name	Tmem18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:25286704 GeneID:211986 MGI:2387176
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 18 transcript_id : NM_172049.1

name	Acp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369381 GeneID:11431 MGI:87881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acid phosphatase 1, soluble transcript_id : NM_021330.3

name	Sh3yl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803283 GeneID:24057 MGI:1346118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sh3 domain YSC-like 1 transcript_id : NM_013709.4

name	9030611O19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560094 GeneID:104943 MGI:1918813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030611O19 gene transcript_id : NM_027828.2

name	EG629667 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262909 GeneID:629667 MGI:3644833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG629667 transcript_id : XM_894578.2

name	LOC100043068 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262831 GeneID:100043068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 6 Proteins product : similar to Ribosomal protein L12 transcript_id : XM_001479442.1

name	Lamb1-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326496 GeneID:16777 MGI:96743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin B1 subunit 1 transcript_id : NM_008482.2

name	Dld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801890 GeneID:13382 MGI:107450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrolipoamide dehydrogenase transcript_id : NM_007861.3

name	Slc26a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130487 GeneID:13487 MGI:107181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 3 transcript_id : NM_021353.2

name	Cbll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527263 GeneID:104836 MGI:2144842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Casitas B-lineage lymphoma-like 1 transcript_id : NM_134048.1

name	Slc26a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364167 GeneID:23985 MGI:1346029
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 4 transcript_id : NM_011867.2

name	LOC100043531 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262912 GeneID:100043531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043531 transcript_id : XM_001480750.1

name	Bcap29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982865 GeneID:12033 MGI:101917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell receptor-associated protein 29 transcript_id : NM_007530.2

name	Dus4l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801159 GeneID:71916 MGI:1919166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrouridine synthase 4-like (S. cerevisiae) transcript_id : NM_028002.2

name	LOC100043081 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262833 GeneID:100043081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100043081 transcript_id : XM_001479458.1

name	Gpr22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801648 GeneID:73010 MGI:1920260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 22 transcript_id : NM_175191.3

name	Hbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23397422 GeneID:73389 MGI:894659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box transcription factor 1 transcript_id : NM_153198.1

name	Hbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29568078 GeneID:73389 MGI:894659
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box transcription factor 1 transcript_id : NM_177993.1

name	Prkar2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89179324 GeneID:19088 MGI:97760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, cAMP dependent regulatory, type II beta transcript_id : NM_011158.3

name	Sntg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370464 CCDS:CCDS25858.1 GeneID:268534 MGI:1919541
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : syntrophin, gamma 2 protein_id : NP_766539.1

name	Tmem18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25286705 GeneID:211986 MGI:2387176
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 18 protein_id : NP_742046.1

name	Acp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542070 GeneID:11431 MGI:87881
definition	GO_function : GO:0003993 - acid phosphatase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IDA] codon_start : 1 product : acid phosphatase 1, soluble protein_id : NP_067305.2

name	Sh3yl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305487 CCDS:CCDS25859.1 GeneID:24057 MGI:1346118
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Sh3 domain YSC-like 1 protein_id : NP_038737.1

name	9030611O19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560095 CCDS:CCDS25860.1 GeneID:104943 MGI:1918813
definition	codon_start : 1 product : hypothetical protein LOC104943 protein_id : NP_082104.2

name	EG629667 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262910 GeneID:629667 MGI:3644833
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899671.2

name	LOC100043068 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262832 GeneID:100043068
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479492.1

name	Lamb1-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326497 CCDS:CCDS25862.1 GeneID:16777 MGI:96743
definition	GO_component : GO:0005605 - basal lamina [Evidence IEA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] GO_function : GO:0019899 - enzyme binding [Evidence IPI]; GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007566 - embryo implantation [Evidence IMP] codon_start : 1 product : laminin B1 subunit 1 protein_id : NP_032508.2

name	Dld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982856 GeneID:13382 MGI:107450
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]; GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : dihydrolipoyl dehydrogenase; branched chain alpha-keto acid dehydrogenase complex subunit E3 product : dihydrolipoamide dehydrogenase protein_id : NP_031887.2

name	Slc26a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946676 CCDS:CCDS25863.1 GeneID:13487 MGI:107181
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015380 - anion exchanger activity [Evidence IDA]; GO:0015297 - antiporter activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008272 - sulfate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : down-regulated in adenoma product : solute carrier family 26, member 3 protein_id : NP_067328.1

name	Cbll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527264 GeneID:104836 MGI:2144842
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007162 - negative regulation of cell adhesion [Evidence IDA]; GO:0030335 - positive regulation of cell migration [Evidence IDA]; GO:0045807 - positive regulation of endocytosis [Evidence IDA] codon_start : 1 note : E-cadherin binding protein E7 product : Casitas B-lineage lymphoma-like 1 protein_id : NP_598809.1

name	Slc26a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755022 GeneID:23985 MGI:1346029
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008509 - anion transporter activity [Evidence ISS]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0009887 - organ morphogenesis [Evidence ISS]; GO:0008272 - sulfate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Pendred's syndrome; Pendred syndrome homolog product : pendrin protein_id : NP_035997.1

name	LOC100043531 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262913 GeneID:100043531
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480800.1

name	Bcap29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671620 CCDS:CCDS25864.1 GeneID:12033 MGI:101917
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 product : B-cell receptor-associated protein 29 protein_id : NP_031556.1

name	Dus4l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312100 CCDS:CCDS25865.1 GeneID:71916 MGI:1919166
definition	GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA]; GO:0006568 - tryptophan metabolism [Evidence IEA] codon_start : 1 product : dihydrouridine synthase 4-like protein_id : NP_082278.1

name	LOC100043081 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262834 GeneID:100043081
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479508.1

name	Gpr22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424810 CCDS:CCDS25866.1 GeneID:73010 MGI:1920260
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 22 protein_id : NP_780400.1

name	Hbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23397423 CCDS:CCDS25867.1 GeneID:73389 MGI:894659
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : high mobility group box transcription factor 1 isoform 1 protein_id : NP_694878.1

name	Hbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29568079 CCDS:CCDS25868.1 GeneID:73389 MGI:894659
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : high mobility group box transcription factor 1 isoform 2 protein_id : NP_818774.1

name	Prkar2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45598396 CCDS:CCDS25869.1 GeneID:19088 MGI:97760
definition	GO_function : GO:0030552 - cAMP binding [Evidence IEA]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence TAS]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : protein kinase, cAMP dependent regulatory, type II beta protein_id : NP_035288.2

name	LOC100043055 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043055
definition	number : 1 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 3 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 2 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 2 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 3 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 4 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 5 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 6 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 7 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 8 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 9 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 10 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 11 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 12 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 13 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 14 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 15 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 16 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 17 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 18 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 19 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 20 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 21 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 22 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 23 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 24 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 25 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 26 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 27 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 28 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 29 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 30 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 31 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 32 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 33 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 34 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 35 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 36 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 37 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 38 pseudo : _no_value

name	LOC100043514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043514
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 39 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 40 pseudo : _no_value

name	LOC629656 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262908 GeneID:629656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 11 Proteins product : similar to Pyruvate kinase, muscle pseudo : _no_value transcript_id : XR_034817.1

name	LOC668786 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262911 GeneID:668786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs product : similar to tripartite motif protein 13 pseudo : _no_value transcript_id : XR_034822.1

clone name	MSMg01-205L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-267D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-521B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-277I18.T7 (MSMg01no277_i18.b1)	MSMg01-277I18.TJ (MSMg01no277_i18.g1)
ACC	AG415418	AG415419
length	741	733
length of high quality (start - end)	356 (386 - 741)	289 (436 - 724)
definition	CHROMAT_FILE: MSMg01no277_i18.b1 PHD_FILE: MSMg01no277_i18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:17:42 2005	CHROMAT_FILE: MSMg01no277_i18.g1 PHD_FILE: MSMg01no277_i18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:17:42 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCATTGTTTATCTTTGAGCCCCATTTTTAAATGGGGTTATTTGATTTT CTGGAGTCCAGCCTCTTGTAGTCCCTTATATATATTGGATATTAGTCCCC TATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGACTT TTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTCGACAATTTTAA GAGGTCCCATTTGTCAATTCTAGATCTTACAGCATAAGCCATTGCTGTTC TATTCAGGAATTTCTCCCCTGTGTCCATATCCTCAAGGTTTTCCCCAACT TTCTCCTCTATATGTTTTTGTGCCTCGCCCCCCCGTGGAGTTCCTTGATC CATTAGATTTGTCCTTAGTACAAGGAGATGAAAATGGATCAATTCACATT CTTCTACATGATAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCT GCCTTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGAC CATAGGTGTGTGTGTTCATTTCTGGGTCTTCAATTCTATTCCATTGATCT ACTTGTCTGTCACTATACCAGTACCACACAGTTTTTATCACAATTGCTCT GTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTAT CCTTGAGAAGAGTTTTTGCTATCCTAGATTTTTTGTTATTN	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXACGTTGAACTAACTTAAGAGGAAA ATTCATCTTATTTAAGAGTTTAATCCCTTGGAGTGTTCTTTTTGGGTTTG AATCATTTTCCCCACACAATGAAAGCGATGTCTGGCAGGAAATCAAGGAA CTCCTTGGGTCCTGGCTTCTCTGCCTCTCTCCTTCTTTTCCTCTCAGATG TTATAGTTTTATTTGGTCGGAAGGATTCCCTGACAAACATCTTCATATCA CTCCTGTAAACTTAGGAGAAGTCCATCTACTCATCTCTCAGCAGCGCAGC TCAGTCTCCGTCTCGGTAGACTCCCCCCCCCCCCTTTGTCAGTTGGAAGG AACCTTGATTGCTTAGCCTGGGGATACAAAAAAACAAAAGCCAAGCCTGC CCTTTAGGCTTGCTTAACGAATGTGTACAGTTGAGGCTCTTCTTAAATAC CCAAAGAGCTCCTTATGATTTTCAAAGCACTGCTGATGGGCTGCTCAGTA GCTCTTGACTCTCCGGAAAGACTCAGATTTTCGTAGGCCTCCAGGAAGTG GCTGTTTGTTGTAGTCCTCTGTACCAGAAAACATGAACAATAGCACTGGT CTTGGGCAGACACTCAGTAAACTTTGTTTAATTGTATTTCCTTACTCTGG TTTCCAGGCCCAGTCCTGGTCAGACCTGGTGTG
quality values	Open. Hide. 6 8 8 8 6 6 13 19 39 39 37 37 37 31 21 19 9 9 9 19 21 41 48 59 35 35 36 36 36 35 39 30 24 18 18 18 25 41 43 42 42 28 30 30 42 41 57 57 47 47 47 47 53 48 47 47 51 59 44 44 36 28 36 28 28 28 24 32 34 54 54 57 57 53 68 68 68 68 68 68 57 54 54 48 48 57 57 68 57 53 53 53 53 53 53 53 53 57 57 57 57 57 48 57 57 59 53 44 44 39 37 37 59 59 27 23 10 10 10 11 10 10 11 16 12 13 12 25 27 47 47 50 50 50 48 48 36 36 36 38 50 38 53 53 57 57 57 57 57 57 53 53 53 53 47 47 47 47 47 51 68 42 42 41 42 43 43 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 44 27 13 8 8 8 10 13 23 32 40 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 25 23 11 11 9 11 11 19 13 12 10 11 11 15 12 6 6 6 6 8 7 9 9 8 8 8 8 8 10 25 41 46 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 59 59 54 54 48 57 57 57 47 32 32 25 19 19 12 12 18 41 41 18 18 14 18 18 29 28 47 36 31 34 24 24 20 28 28 42 42 43 44 44 44 44 44 57 57 68 57 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 59 68 68 59 59 59 57 57 59 59 68 59 59 54 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 57 57 57 57 57 52 57 57 52 57 57 68 68 68 68 68 59 59 59 68 59 59 59 59 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 59 41 41 33 33 33 44 44 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 54 54 54 57 59 59 68 68 68 50 51 50 57 57 57 57 57 57 57 59 57 57 57 57 57 57 59 59 57 47 47 47 57 57 57 68 57 57 47 47 47 47 43 43 41 43 43 46 46 57 57 57 57 46 46 48 48 48 47 28 28 13 13 13 34 41 59 59 59 59 48 48 48 39 39 39 39 43 48 48 43 37 37 28 23 28 28 23 22 22 22 29 37 32 29 29 31 30 35 31 30 31 26 31 25 27 30 30 32 29 25 39 32 30 27 22 22 24 25 32 29 31 43 30 37 30 28 22 19 25 20 20 19 32 36 37 39 36 36 36 32 27 15 11 11 11 16 22 34 39 39 39 31 31 32 28 17 18 10 3 0	Open. Hide. 10 10 9 13 13 8 8 8 8 15 22 37 37 37 41 48 48 53 53 53 53 53 53 44 50 50 50 47 47 28 27 10 8 8 8 8 8 8 13 10 16 16 28 22 30 16 16 26 35 39 47 47 41 44 39 41 41 39 33 24 10 9 9 10 10 16 11 11 11 12 10 10 23 23 33 33 37 37 37 59 59 53 53 53 53 57 57 57 57 59 59 59 59 59 59 59 59 59 50 50 50 50 50 38 53 53 53 53 53 59 50 50 50 47 34 27 12 12 9 11 9 11 11 10 10 11 12 12 15 22 23 39 41 41 50 50 53 53 59 59 57 59 59 53 53 53 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 57 57 57 48 50 57 57 68 57 59 54 54 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 48 57 59 59 68 59 59 59 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 50 37 50 43 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 34 29 18 15 15 20 20 24 24 34 28 43 44 53 53 53 59 53 53 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 33 27 18 12 9 9 6 6 6 6 6 6 9 9 9 9 10 10 12 15 16 11 10 10 10 9 8 8 8 8 15 22 27 43 47 50 50 50 59 59 59 59 59 57 57 57 57 57 53 57 57 57 57 57 59 59 59 59 59 43 43 47 30 34 30 16 14 8 8 8 8 8 11 15 11 9 9 9 11 11 27 27 44 47 41 41 39 39 39 37 39 43 39 39 39 43 43 43 43 59 59 59 59 59 57 57 57 57 68 57 68 68 68 59 59 59 59 59 59 59 68 59 57 57 59 57 57 48 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 68 68 68 68 68 68 57 57 57 57 48 48 59 59 68 68 68 57 57 57 59 59 54 54 54 59 59 59 68 68 68 59 59 59 59 57 57 57 57 57 57 48 48 48 48 39 37 30 39 30 39 37 59 59 59 59 41 41 41 39 36 34 41 59 47 39 40 37 37 37 37 48 43 43 40 40 43 43 57 57 57 59 57 48 48 48 48 48 47 59 59 59 59 42 42 42 41 40 44 44 37 37 37 37 37 37 37 37 37 37 37 31 30 37 41 41 37 39 37 32 29 29 37 39 47 47 43 47 47 47 43 40 40 43 43 48 39 47 39 39 43 44 42 42 41 41 47 41 41 29 29 37 29 32 30 37 39 39 35 39 39 44 41 41 43 59 47 47 47 43 39 37 34 34 31 35 27 29 37 39 37 32 27 27 28 28 24 25 28 30 24 22 28 31 22 21 11 13 13 25 18 15 10 10 13 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no277_i18.g1 MSMg01no277_i18.g1 CHROMAT_FILE:
MSMg01no277_i18.g1 PHD_FILE: MSMg01no277_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:42 2005
         (289 letters)



>mm_chr12_31830317_31831005
          Length = 689

 Score =  528 bits (273), Expect = e-154
 Identities = 285/289 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagccaagcctgccctttaggcttgcttaacgaatgtgtacagttgaggctcttctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aaaagccaagcctgccctttaggcttgcttaacgaatgtgtacagttgaggctcttctta 430

                                                                       
Query: 61  aatacccaaagagctccttatgattttcaaagcactgctgatgggctgctcagtagctct 120
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatacccaaagagctccttacgactttcaaagcactgctgatgggctgctcagtagctct 370

                                                                       
Query: 121 tgactctccggaaagactcagattttcgtaggcctccaggaagtggctgtttgttgtagt 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgactctctggaaagactcagattttcgtaggcctccaggaagtggctgtttgttgtagt 310

                                                                       
Query: 181 cctctgtaccagaaaacatgaacaatagcactggtcttgggcagacactcagtaaacttt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 309 cctctgtaccagaaaacatgaacaatagcactggtcttgggcagacactcagcaaacttt 250

                                                            
Query: 241 gtttaattgtatttccttactctggtttccaggcccagtcctggtcaga 289
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gtttaattgtatttccttactctggtttccaggcccagtcctggtcaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space:   190400
Effective search space used:   190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information