XXXXXXXXXXXXXXXXXXXXXXXXXTGCGNGACGGGGGGCGGAATTCCAT
TAGGGTGTCAATAATAGATCTCACTATTTCTCAAATCTTTCTTTTCATGG
CTCCTTAATAACTCTACCCAATTTTAATTTGCACAAAAAAATCCACAGCA
TCTTTAGAAACTTTTAATTAGCTATAAAATAAAACTCTTCTCCTCCCAGG
AAGACATATATGATCATCTTTGGAGTAGCCTCCCCAGTAAGTTCTCATTA
ATAGAAGTTAGCTCTCTGTGATAGTACCACATGTAATTCTCCAGCAAATG
TTCAATTGTGCATGTTGCTCTTTTCTCGTCTTCTAGCTGCAAACAAAACA
AGGTTTGTTTTTTTTTACCCCCCCCCCCCCCCAGTATGGNAAAATGTTTG
CACGGAGTGTGGTAAGCACCGAAAAAAAAAAAGTATTCTGGGGGGGGGTG
ACGATGCACGGCTTGCAACCATTCTGAGGACTATATAGCACAGGAGACAA
ACTGATTAAGAAACCCCAAGTGTATGCTGAAAGGAATAGAGTATGCAAGA
GAACACTGGCCTAGGTAGACACAGAATGGAATGAATAATGTTGGCACAAA
ACAATCAAGCCCATCTAAACGAATATGAGAGAACATTCAGAACATTTTGG
GATTGGCAGCTTTTTAGGGCTTTCCCCAATTTGAGGCCATTATTTATGAA
ATTAAAATAATGGGGGAGAAGTGACAATTAAAGCCCAGATGATCTGAGGA
AGCCAAATGAAGCAATTTAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAACTCAGTTCCACTGTCAACACTC
TCAACTGACTGAACTGCACTGCACTGAACAAAAACCAACTGTTAGGGATT
TGTACTAAGGGCTTGTCTGGATTCCAGCAGGATCATATAGCTCGATATGG
TTTTTGGATGTGATCCCTTGCCAGAGCAGCCATGTTGCTGGATTAAAATT
CCTCTACAAATAGATAAGTTTTAATTTTAACAGTTGGGCAACAGAGGCCA
CGAGATCAGGAGTTTTGGCTACAAAGTGAATTTACGTCTAGCTTGAGATG
TAAGACCCCATCTTAAGTATTATCAAAGGCCCGCCCTGTTTTGTTTTGTT
TTGTTTTTTAAAAAGAGCTTGTTAATTTCCTTAAAACTCTGATGTTACTA
TTTAGGAAAAAGTATTTTAATACTTTTCTTTATTAGCTAATGGCTGAGTT
CAGATAGATAGCTTGCTTGGCCATTCAAAGCATTAGCTGCATTTGCAGAG
GACCCAGGTTGGATTGCCATGAGGCAGCACCCAGCTACCTATACCTTCAA
TTTCAGGGGATTCAACGCCAACTTCTGTACTGTGCTGGCACTTAAAGTAC
ATTTGGAACTACATACACCTAGGCAGTCATGCATGAGTATGTGGTATGCA
TGAATGCCCATGTGTATACACACACACACACCCTCACACTCACCCACTAC
ACACATACATCTACATCCTAA

Query= MSMg01no279_h02.b1 MSMg01no279_h02.b1 CHROMAT_FILE:
MSMg01no279_h02.b1 PHD_FILE: MSMg01no279_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:02 2005
         (245 letters)



>mm_chr12_51292252_51292896
          Length = 645

 Score =  451 bits (233), Expect = e-131
 Identities = 242/245 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcactatttctcaaatctttcttttcatggctccttaataactctacccaattttaatt 60
           |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 201 ctcactatttctcaaatctttcttttcatggctccttaataactctaattaattttaatt 260

                                                                       
Query: 61  tgcacaaaaaaatccacagcatctttagaaacttttaattagctataaaataaaactctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcacaaaaaaatccacagcatctttagaaacttttaattagctataaaataaaactctt 320

                                                                       
Query: 121 ctcctcccaggaagacatatatgatcatctttggagtagcctccccagtaagttctcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctcccaggaagacatatatgatcatctttggagtagcctccccagtaagttctcatt 380

                                                                       
Query: 181 aatagaagttagctctctgtgatagtaccacatgtaattctccagcaaatgttcaattgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagaagttagctctctgtgatagtaccacatgtaattctccagcaaatgttcaattgt 440

                
Query: 241 gcatg 245
           |||||
Sbjct: 441 gcatg 445


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space:   150096
Effective search space used:   150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no279_h02.g1 MSMg01no279_h02.g1 CHROMAT_FILE:
MSMg01no279_h02.g1 PHD_FILE: MSMg01no279_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:02 2005
         (291 letters)



>mm_chr12_51384751_51385441
          Length = 691

 Score =  563 bits (291), Expect = e-165
 Identities = 291/291 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aactcagttccactgtcaacactctcaactgactgaactgcactgcactgaacaaaaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aactcagttccactgtcaacactctcaactgactgaactgcactgcactgaacaaaaacc 614

                                                                       
Query: 61  aactgttagggatttgtactaagggcttgtctggattccagcaggatcatatagctcgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aactgttagggatttgtactaagggcttgtctggattccagcaggatcatatagctcgat 554

                                                                       
Query: 121 atggtttttggatgtgatcccttgccagagcagccatgttgctggattaaaattcctcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atggtttttggatgtgatcccttgccagagcagccatgttgctggattaaaattcctcta 494

                                                                       
Query: 181 caaatagataagttttaattttaacagttgggcaacagaggccacgagatcaggagtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 caaatagataagttttaattttaacagttgggcaacagaggccacgagatcaggagtttt 434

                                                              
Query: 241 ggctacaaagtgaatttacgtctagcttgagatgtaagaccccatcttaag 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggctacaaagtgaatttacgtctagcttgagatgtaagaccccatcttaag 383


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)