TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATTCTCAAGTCTTGAATTTTCTTCACCATTTCCATCAGGCATAT
GTTAGCGTTTTCTTGGGCATTTATCCTGCTTAAGTTCTTTTTCTTTAATA
TATTAAGTGTTTCTTTGTGTCTTTTTTTGGTTTTTGTTTTTGTTTTTTTT
AATTAGGTATTTATTTCATTTACATTTCCAATTCTATCCCAAAAGTCCCG
CATCCACTCCCCCACCCGCCCACTACCACTTCTTGGCCCTGGCATTCCCC
TGTACTGAGGCAGATAAAGTTTGCACTACCAATGGGCCTCTCTTTCCACT
GATGGCCAACTAGGCCATCTTAAAATACATATGCAGCTAGAGACATGAGC
TCTGGGGGGTACTGGGTAGTTCACATTTTTGTTCCACCTATAGGGTTGTA
AATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCGATTGGGGGCCC
TGTGATCCATCCAATAGCTGACTATGAGCATTCACTTATGTGTTTGCTAG
GCCCCGGAATAGTCTCACAAGAGACAGCTATATATGGGTCCTTTCAGCAA
AATCTTGCTAGTGTATGCAATGGTGTCAACGCTTGGAGGCTGATTATGGG
GTGGATCCTCAGATATGGCAGTCTCTAGATGGTCTATCCTTTTGTCTCAG
CTCCAAACTGTGTCTCTGTAACTCCTTCCATGGGTCTTTTGTTCCCAATT
CTAAGAAGGGGCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGCGTGAGGCCAGGCCAGAGATC
TCCATGGAAAACCTCTGGTACACAGAGCCATAATTTCTATTTCATAGAAA
TAAAAAAGAATTTTTAAAGTTTCCTCATAAAGTCAGTACCCTTTTTGAGA
TAAAAAATAAACCTACAAATATGGTCATTTATAAATATTAAGAGAAAATA
CTAAACAAAATGTAGGCAAAGATATATAACTACATTACAAAATCATCATG
ACAAAATGTTGTCCAATTATTTCAGTTATTTAAACACATTTTAACACTAG
GAAAGTCTTTGATAAAATTTATCATATTAATTGACTTTTCTTCATACATG
AATAAAAGACTAGCCAAGTTCAACATGCATTTTATGATCACAATATGATA
GGTATTTCCTTGTGTTTGGTTTGAATTTTCATTATGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTCTGTGTGTATC
TGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTGTNCNGAGGATTT
TCCTTTTCTACCTTTATGTGGATTTGGGGATTGAGCTCATATCAGGCAAA
TTTATCTACTGATCCATCTCATCAGATCAGTACCAACAACAAAAATATTT
AACATCTCTCAGTATCAATCAGTTGTCATTCCAGGACTTCTGTTTGTATT
TGTTCCACACTTCATTA

Query= MSMg01no293_h01.g1 MSMg01no293_h01.g1 CHROMAT_FILE:
MSMg01no293_h01.g1 PHD_FILE: MSMg01no293_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:51 2005
         (590 letters)



>mm_chr12_61061527_61062516
          Length = 990

 Score = 1033 bits (534), Expect = 0.0
 Identities = 580/608 (95%), Gaps = 22/608 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcgtgaggccaggccagagatctccatggaaaacctctggtacacagagccata---- 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 668 ttgcgtgaggccaggccagagatctccatggaaaacctctggtacacagagccataattt 609

                                                                       
Query: 57  atttctatttcatagaaataaaaaagaatttttaaagtttcctcataaagtcagtaccct 116
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 608 atttctatttcatagaaataaaaaagaattttttaagtttcctcataaagtcagtaccct 549

                                                                       
Query: 117 ttttgagataaaaaataaacctacaaatatggtcatttataaatattaagagaaaatact 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttttgagataaaaaataaacctacaaatatggtcatttataaatattaagagaaaatact 489

                                                                       
Query: 177 aaacaaaatgtaggcaaagatatataactacattacaaaatcatcatgacaaaatgttgt 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaacaaaatgtaggcaaagatatataactacattacaaaatcatcatgacaaaatgttgt 429

                                                                       
Query: 237 ccaattatttcagttatttaaacacattttaacactaggaaagtctttgataaaatttat 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 428 ccaattatttcagttatttaaacacattttaacactaggaaagtctttgataaaattcat 369

                                                                       
Query: 297 catattaattgacttttcttcatacatgaataaaagactagccaagttcaacatgcattt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 catattaattgacttttcttcatacatgaataaaagactagccaagttcaacatgcattt 309

                                                                       
Query: 357 tatgatcacaatatgataggtatttccttgtgtttggtttgaattttcattatgtgtgtg 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tatgatcacaatatgataggtatttccttgtgtttggtttgaattttcattatgtgtgtg 249

                                                                       
Query: 417 tgtgtgtgtgtgtgtgtgtgtgtg------------tgtgtgtgtgtctgtgtgtgtgtc 464
           ||||||||||||||||||||||||            ||||||||||||||||||||||||
Sbjct: 248 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtc 189

                                                                       
Query: 465 tgtgtgtatctgtgtctgtgtgtgtctgtgtgtgtctgtg--tgtgtgtgtncngaggat 522
           ||||||||||||||||||||||||||    ||||||||||  ||||||||| | ||||||
Sbjct: 188 tgtgtgtatctgtgtctgtgtgtgtc----tgtgtctgtgtctgtgtgtgtacagaggat 133

                                                                       
Query: 523 tttccttttctacctttatgtggatttggggattgagctcatatcaggcaaatttatcta 582
           | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132 tctccttttctacctttatgtggatttggggaatgagctcatatcaggcaaatttatcta 73

                   
Query: 583 ctgatcca 590
           ||||||||
Sbjct: 72  ctgatcca 65


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)