Query= MSMg01no295_l15.b1 MSMg01no295_l15.b1 CHROMAT_FILE:
MSMg01no295_l15.b1 PHD_FILE: MSMg01no295_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:44 2005
(319 letters)
>mm_chr12_80478081_80478799
Length = 719
Score = 559 bits (289), Expect = e-164
Identities = 312/325 (96%), Gaps = 10/325 (3%)
Strand = Plus / Plus
Query: 4 ggaattcctctttctcttctttcattttcttctttccaa-ttgttctcatccatttagtg 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 194 ggaattcctctttctcttctttcattttcttctttccaaattgttctcatccatttagtg 253
Query: 63 tagggagtctttcaatgtttggtgtcatcatggggaaca---------cttgattgcctg 113
|||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 254 tagggagtctttcaatgtttggtgtcgtcatggggaacaaaagtgacacttgattgcctg 313
Query: 114 aagtcccatagcttttgctgtgtattttctgcatctggggtctattctgttaccatataa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aagtcccatagcttttgctgtgtattttctgcatctggggtctattctgttaccatataa 373
Query: 174 aactattaaacattgcaattcaaaactgtatgtcccacaatcaactatttataaacacat 233
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 374 aactattaaacattgcaattcaaaactgtatgtcccacaatcaagtatttataaacacat 433
Query: 234 ctgaaacttgtaagtataacccgctctgagatagggaggccatgtttatgatacaggagt 293
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 434 ctgaaacttgtaagtataacccgctctgagatggggaggccatgtttatgatacaggagt 493
Query: 294 gttacattctctctgcaatgtttca 318
|||||||||||||||||||||||||
Sbjct: 494 gttacattctctctgcaatgtttca 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_l15.g1 MSMg01no295_l15.g1 CHROMAT_FILE:
MSMg01no295_l15.g1 PHD_FILE: MSMg01no295_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:44 2005
(284 letters)
>mm_chr12_80645565_80646245
Length = 681
Score = 472 bits (244), Expect = e-137
Identities = 273/284 (96%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 1 cagttctacctgatgttgtacatctcagtttactttccaaagactttcaagagtatactt 60
|||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct: 481 cagttctacctgctgttgtacatctcagttcactttccaaagcctttaaagagtatactt 422
Query: 61 ggtgtgtcttctaagactcatgcctgataaagtaagcctccaccttacctcctgggggtt 120
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 ggtgtgtcttctaagattcatgcctgat---gtaagcctccaccttacctcctgggggtt 365
Query: 121 ttcaggattagatagattagaaaatctgcccacattccgagtccagacaacagaatagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcaggattagatagattagaaaatctgcccacattccgagtccagacaacagaatagtg 305
Query: 181 gatctgcatggaagccaggcacagtgggaggatcagcccacagcctcagaaccctggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gatctgcatggaagccaggcacagtgggaggatcagcccacagcctcagaaccctggcaa 245
Query: 241 ttcactatttaaggaataaacaagctttgctgttactgaccacg 284
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcactaacaaaggaataaacaagctttgctgttactgaccacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 681
Length adjustment: 9
Effective length of query: 275
Effective length of database: 672
Effective search space: 184800
Effective search space used: 184800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
