Query= MSMg01no300_h15.b1 MSMg01no300_h15.b1 CHROMAT_FILE:
MSMg01no300_h15.b1 PHD_FILE: MSMg01no300_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:38 2005
(227 letters)
>mm_chr12_86864868_86865493
Length = 626
Score = 385 bits (199), Expect = e-111
Identities = 220/227 (96%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 1 cattcaacctccaaggaaagatcaatttacagtgggcaagctgtttagcaggtggcggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcaacctccaaggaaagatcaatttacagtgggcaagctgtttagcaggtggcggac 260
Query: 61 agagttctaaaaactgtcttgatcaaaacccaattactaaacccaggagtttgctcctct 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 agagttctaaaaa-tgtcttgatcaaaacccaattactaaacccaggagtttgcttctct 319
Query: 121 gaaggtttgtctctctcggagcctggaatgtgctttgttgggtaatgacacttgatacca 180
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 320 gaaggtttgtttctctcggagcctggaatgtgctttgctgggtaatgacacttgacacca 379
Query: 181 agccctgaggatttgattttgatcccttgaacccaagtgactggaag 227
|||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 380 agccctgaggatctgaatttgatcccttgaacccaagtgactggaag 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 626
Length adjustment: 9
Effective length of query: 218
Effective length of database: 617
Effective search space: 134506
Effective search space used: 134506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no300_h15.g1 MSMg01no300_h15.g1 CHROMAT_FILE:
MSMg01no300_h15.g1 PHD_FILE: MSMg01no300_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:38 2005
(119 letters)
>mm_chr12_87049780_87050298
Length = 519
Score = 221 bits (114), Expect = 2e-62
Identities = 117/118 (99%)
Strand = Plus / Minus
Query: 1 caagagaaagtagttcgcaggatgctgatgggagaagtgagggaagccgctttccagggc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caagagaaagtagttcgcacgatgctgatgggagaagtgagggaagccgctttccagggc 259
Query: 61 tggttttttagaaaatatttatttagaaaactatccaccccctgccctcctccctctg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tggttttttagaaaatatttatttagaaaactatccaccccctgccctcctccctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
