Query= MSMg01no303_l14.b1 MSMg01no303_l14.b1 CHROMAT_FILE:
MSMg01no303_l14.b1 PHD_FILE: MSMg01no303_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:42 2005
(440 letters)
>mm_chr12_77687205_77688045
Length = 841
Score = 741 bits (383), Expect = 0.0
Identities = 419/437 (95%), Gaps = 11/437 (2%)
Strand = Plus / Plus
Query: 5 gaattcttcaggatcac-gagtctcccaatggctgtcccggtttgaagtttgaaatagct 63
||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattcttcaggaccacagagtctcccaatggctgccccggtttgaagtttgaaatagct 264
Query: 64 gtgttggccatgaagctccagaggcaacactggcttccacctcccagtgctagccatttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgttggccatgaagctccagaggcaacactggcttccacctcccagtgctagcca---- 320
Query: 124 ttttttttttttttttttttgggaatgctgctaaaagggaagggcctcagggatgaacat 183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ------ttttttttttttttggtaatgctgctaaaagggaagggcctcagggatgaacat 374
Query: 184 gactggctcagtgacatgaaagggtgcctgccatctttgcatcagcactggaaaggacct 243
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 375 gactggctcagtgacatgaaaggatgcctgccatctttgcatcagcactggaaaggacct 434
Query: 244 gcagaaggtatctaggtcactaatattccctagtcttctcccattttacagcaaggaaag 303
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 gcagaaggcatctaggtcactaatattccctagtcatctcccattttacagcaaggaaag 494
Query: 304 taaagtccagatgggtaaaagtggggcttggttaagaccatgtgagtgccagggcttcct 363
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taaagtccatatgggtaaaagtggggcttggttaagaccatgtgagtgccagggcttcct 554
Query: 364 gttgcccacccctgtgataactgggcggcgctcatcaggaacctactgtttcccaggcac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gttgcccacccctgtgataactgggcggcgctcatcaggaacctactgtttcccaggcac 614
Query: 424 agcctctgttctgagaa 440
|||||||||||||||||
Sbjct: 615 agcctctgttctgagaa 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 841
Length adjustment: 9
Effective length of query: 431
Effective length of database: 832
Effective search space: 358592
Effective search space used: 358592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_l14.g1 MSMg01no303_l14.g1 CHROMAT_FILE:
MSMg01no303_l14.g1 PHD_FILE: MSMg01no303_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:42 2005
(322 letters)
>mm_chr12_77870540_77871260
Length = 721
Score = 528 bits (273), Expect = e-154
Identities = 306/317 (96%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 4 tctgtgagaaacatctacccaaagttaaataactaaatatcacttattgcttacagaaga 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 354 tctgtgagaaacatctacccaaagataaataactaaatatcacttattgcttacagaaga 295
Query: 64 gcttcctaataaaaccaggctggtttatacagactgaggtccaagtcagccaaggctatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gcttcctaataaaaccaggctggtttatacagactgaggtccaagtcagccaaggctatg 235
Query: 124 taaagaaacctgtctttttttttgtttgggtttttttcttcttcaagacagggtttctct 183
|| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 234 tagagaaacctgtctttttgtt-gtttgggtttttttcttcttcaagacagggtttctgt 176
Query: 184 gtgtagccctggctgtcctggaacgcactctgtagatcaagctggccttgaactcagtaa 243
|||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 175 gtgtagtcctggctgtcctggaacacactctgtagatcaagatggccttgaactcagtaa 116
Query: 244 tctttctctgccttgactactgggataaaaggcctgagccaccacccaccaagtttctgt 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tccacctctgccttgactactgggataaaaggcctgagccaccacccaccaagtttctgt 56
Query: 304 ttcttttcttttctttt 320
|||||||||||||||||
Sbjct: 55 ttcttttcttttctttt 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
