Query= MSMg01no303_p10.b1 MSMg01no303_p10.b1 CHROMAT_FILE:
MSMg01no303_p10.b1 PHD_FILE: MSMg01no303_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:00 2005
(650 letters)
>mm_chr12_32076095_32077146
Length = 1052
Score = 1226 bits (634), Expect = 0.0
Identities = 647/652 (99%), Gaps = 2/652 (0%)
Strand = Plus / Plus
Query: 1 cataatgaggcacaaaatcaatggagacaggaagatgtgtctggacccttcctcggcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataatgaggcacaaaatcaatggagacaggaagatgtgtctggacccttcctcggcagc 260
Query: 61 cactatacagctatggtgacttgaccaggatggtagcagctcagatagtaagcaatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactatacagctatggtgacttgaccaggatggtagcagctcagatagtaagcaatgctc 320
Query: 121 aaatgtaatactttcatgataccgtaagaacaaaaggaaaaaaaaa--catgcccaaata 178
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 321 aaatgtaatactttcatgataccgtaagaacaaaagaaaaaaaaaaaacatgcccaaata 380
Query: 179 aacaaacgctagcattaatttatacaaagatttcattttaccaattttattagtgtgagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaaacgctagcattaatttatacaaagatttcattttaccaattttattagtgtgagt 440
Query: 239 ccaagaaaacacatcaaaattcaaaactatattaaaaacacaaactaggtcagtgcctaa 298
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaagaaaacacaccaaaattcaaaactatattaaaaacacaaactaggtcagtgcctaa 500
Query: 299 tctgtacagtgcaggtgagctggggacggaaccccaggggaactgcttagccatagggca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtacagtgcaggtgagctggggacggaaccccaggggaactgcttagccatagggca 560
Query: 359 catcctgtaccattagccaacataagcttgtggttccccttgcctctactttttggggca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcctgtaccattagccaacataagcttgtggttccccttgcctctactttttggggca 620
Query: 419 gaaccgaaagcaatgaacacacacgcacacacacgctcacgcatgaatgctcacgctcga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaccgaaagcaatgaacacacacgcacacacacgctcacgcatgaatgctcacgctcga 680
Query: 479 gcacacacatctagatgctctcaagtgacaccgaaaagtaaagagcttgaatgtcggtta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcacacacatctagatgctctcaagtgacaccgaaaagtaaagagcttgaatgtcggtta 740
Query: 539 ataaaaaggacagaaaagggctcgtctccatggtcaaagtcatgccgtaccactcttctg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataaaaaggacagaaaagggctcgtctccatggtcaaagtcatgccgtaccactcttctg 800
Query: 599 aactttatggtctatcactgggaagcattatacaatcaattcacaaactgtg 650
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 801 aactttatggtctatcgctgggaagcattatacaatcaattcacaaactgtg 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1052
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1042
Effective search space: 666880
Effective search space used: 666880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_p10.g1 MSMg01no303_p10.g1 CHROMAT_FILE:
MSMg01no303_p10.g1 PHD_FILE: MSMg01no303_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:00 2005
(644 letters)
>mm_chr12_32223549_32224592
Length = 1044
Score = 1166 bits (603), Expect = 0.0
Identities = 606/607 (99%)
Strand = Plus / Minus
Query: 1 attgcctttgggataagcaacgtcttctctggatttttctcctgttttgtggctaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 attgcctttgggataagcaacgtcttctctggatttttctcctgttttgtggctaccact 548
Query: 61 gctctgtctcgaacggctgtccaggagagcaccggggggaagacacaggtacgtagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gctctgtctcgaacggctgtccaggagagcaccggggggaagacacaggtacgtagagac 488
Query: 121 agagggataaccctgatagcaggtaacaggagggggatggtggcttagagaagcttccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agagggataaccctgatagcaggtaacaggagggggatggtggcttagagaagcttccac 428
Query: 181 aaaactggacacaacagttcttagccttcagagaggaacttgtgtttctttatctgatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaaactggacacaacagttcttagccttcagagaggaacttgtgtttctttatctgatcc 368
Query: 241 aacttgggcctcatctctttgacttgcccaacccttatcaaaaaaaattctttaatagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aacttgggcctcatctctttgacttgcccaacccttatcaaaaaaaattctttaatagca 308
Query: 301 atatttacgggctcctggaaccatgattgccaaatttttatttgtcagtgtttacatggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atatttacgggctcctggaaccatgattgccaaatttttatttgtcagtgtttacatggc 248
Query: 361 tgataactgcacacagaactacactcagaacaacaaaataaaagggaggactgaagagat 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcataactgcacacagaactacactcagaacaacaaaataaaagggaggactgaagagat 188
Query: 421 ggcttagaggttaagagcactgactgttcttccaggggtcctgagttcaaatcccagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggcttagaggttaagagcactgactgttcttccaggggtcctgagttcaaatcccagcaa 128
Query: 481 ccacatggtagctcatgaccatctataatgggattcgatgtcctcttctagtatgtccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccacatggtagctcatgaccatctataatgggattcgatgtcctcttctagtatgtccaa 68
Query: 541 agatagcaacagttatttacctatgtaacaaaaacaaataaatcttaaaaagggtgggga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agatagcaacagttatttacctatgtaacaaaaacaaataaatcttaaaaagggtgggga 8
Query: 601 acaaaag 607
|||||||
Sbjct: 7 acaaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
