Query= MSMg01no304_k08.b1 MSMg01no304_k08.b1 CHROMAT_FILE:
MSMg01no304_k08.b1 PHD_FILE: MSMg01no304_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:34 2005
(730 letters)
>mm_chr12_3542737_3543866
Length = 1130
Score = 963 bits (498), Expect = 0.0
Identities = 513/518 (99%), Gaps = 1/518 (0%)
Strand = Plus / Minus
Query: 213 agaggaataattaaaatccttcacaagtttctccaaaagaggactgactatttcctaatt 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1130 agaggaataattaaaatccttcacaagtttctccaaaagaggactgactatttcct-att 1072
Query: 273 cacctggaggctagtaccacactcataccaaaagcaaagcataaactgggtgttgtgata 332
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 1071 cacctggaggctagtaccacactgataccaaaaccaaagcataaactgggtgttgtgata 1012
Query: 333 tgcattggtaatcccagcacttcggaggccaaggcagggttatgagttcaatactatcct 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 tgcattggtaatcccagcacttcggaggccaaggcagggttatgagttcaatactatcct 952
Query: 393 tggctacacagtacgaccatgaccatctatgatggattctgtttagatgcttacccagta 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 tggctacacagtacgaccatgaccatctatgatggattctgtttagatgcttacccagta 892
Query: 453 tttatccccaatttcttccttaacagagcccagttttgctcatgagtctctttgccagaa 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 tttatccccaatttcttccttaacagagcccagttttgctcatgagtctctttgccagaa 832
Query: 513 gagtcaacacttccagaccagaggtatcttaactggccctgagtgagccagcagtctact 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gagtcaacacttccagaccagaggtatcttaactggccctgagtgagccagcagtctact 772
Query: 573 cctcttgccagtggctagaaagttggggggcggggtcattctctttctgcaccttgtgat 632
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 771 cctcttgccagtggctagaaagttggggggtggggtcattctctttctgcaccttgtgat 712
Query: 633 atgtcactgctgagtggggcttatgtgcaggacagtgaatgtggtgagaaggaagggata 692
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 711 atgtcactgctgagtggggcttatgtgcaggacagtgaacgtggtgagaaggaagggata 652
Query: 693 ggaagttcctgggacgttgtaaagatggcattatgttt 730
||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggaagttcctgggacgttgtaaagatggcattatgttt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 730
Length of database: 1130
Length adjustment: 10
Effective length of query: 720
Effective length of database: 1120
Effective search space: 806400
Effective search space used: 806400
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no304_k08.g1 MSMg01no304_k08.g1 CHROMAT_FILE:
MSMg01no304_k08.g1 PHD_FILE: MSMg01no304_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:34 2005
(656 letters)
>mm_chr12_3445023_3446078
Length = 1056
Score = 1268 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Plus
Query: 1 ctgaatttaaatgtgcaattttagacaacaatgttttggattaatttatgcatttaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaatttaaatgtgcaattttagacaacaatgttttggattaatttatgcatttaaaaa 260
Query: 61 atgtaatgttttatgtagtaaggtgatgacgattactaatttgaggattgttagtattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtaatgttttatgtagtaaggtgatgacgattactaatttgaggattgttagtattgc 320
Query: 121 tggaagatcatggtataaattatttgggggagcttattgttacttgtaaagaaaaattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaagatcatggtataaattatttgggggagcttattgttacttgtaaagaaaaattaa 380
Query: 181 aacctttttttttccctccttattttcttggggtgcattccaactccagaaggtaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacctttttttttccctccttattttcttggggtgcattccaactccagaaggtaagaag 440
Query: 241 tattactttattctaaaggagcattaagcaattataaagcactcttttacaagttttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattactttattctaaaggagcattaagcaattataaagcactcttttacaagttttatt 500
Query: 301 gagtgtgcctttgtatgcatgatctttactttatcaaactaactagcttagaaatgaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtgtgcctttgtatgcatgatctttactttatcaaactaactagcttagaaatgaaat 560
Query: 361 aactgtgatagtgtataaatattagtcactaagtgtgctcttttttattgtttattttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactgtgatagtgtataaatattagtcactaagtgtgctcttttttattgtttattttta 620
Query: 421 tagtttgtaaccattacatggccataattttagaaattgttgacattaaggtttatcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagtttgtaaccattacatggccataattttagaaattgttgacattaaggtttatcaaa 680
Query: 481 acttaaatttgccttataccactgaagtataatttagcatgttgatgaaaacacttacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttaaatttgccttataccactgaagtataatttagcatgttgatgaaaacacttacaa 740
Query: 541 gatagagatgtgcatgttgcctgttgcctatgagattaaaaatatttttgcttgacttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatagagatgtgcatgttgcctgttgcctatgagattaaaaatatttttgcttgacttat 800
Query: 601 atagagaaaatatggtcaattgtctataatcaagtgatacttacctgaaaccaggc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atagagaaaatatggtcaattgtctataatcaagtgatacttacctgaaaccaggc 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
