Query= MSMg01no317_p03.b1 MSMg01no317_p03.b1 CHROMAT_FILE:
MSMg01no317_p03.b1 PHD_FILE: MSMg01no317_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:01 2005
(696 letters)
>mm_chr12_57864948_57866049
Length = 1102
Score = 677 bits (350), Expect = 0.0
Identities = 414/458 (90%), Gaps = 37/458 (8%)
Strand = Plus / Minus
Query: 5 gaattcaccgaactacaccttgcctcatatttacttaggataaaatttactttctgcatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaattcaccgaactaaaccttgcctcatatttacttaggataaaatttactttctgcatt 399
Query: 65 ataaatatttcataaatgttgacaaatcaggatttaacaaa------atgaccgtcattt 118
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 398 ataaatatttcataaatgttgacaaatcaggatttaacaaaatgaccatgaccgtcattt 339
Query: 119 agatgatctagaccagcgtttactcacagtaactcaggaactgagctaaggtttcatttt 178
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 338 agatgatctagaccagcgtttactcacagtaactaaggagctgagctaaggtttcatttt 279
Query: 179 gatgtggtactttctaggcagtatcacacaaattgaaaatgcacttagcagtgagggtaa 238
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 278 gatgtggtactttctaggcagtatcacacaaattaaaaatgcacttagcagtgagggtaa 219
Query: 239 ccaggcatgtaataagccatcaactgcccataggtccccagctagagatgggggctcata 298
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 218 ccaggcatgtaataagccatcaactgcccatagatccccagctagagatgggggctcata 159
Query: 299 aacc-----tcc--------------------------tcttgttcaggtgtcttgtggg 327
|||| ||| |||||||||||||||||| |||
Sbjct: 158 aaccccctctccccatgctagaatgtcaactagtttgatcttgttcaggtgtcttgcggg 99
Query: 328 cagccacaactgctgtgagttcaggggtgtggtagtcctgtcatgtccagaagatagttt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cagccacaactgctgtgagttcaggggtgtggtagtcctgtcatgtccagaagatagttt 39
Query: 388 tgtgactatcctcccaaacctctggctcttataatcct 425
||||||||||||||||| ||||||||||||||||||||
Sbjct: 38 tgtgactatcctcccaaccctctggctcttataatcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1102
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1092
Effective search space: 749112
Effective search space used: 749112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_p03.g1 MSMg01no317_p03.g1 CHROMAT_FILE:
MSMg01no317_p03.g1 PHD_FILE: MSMg01no317_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:01 2005
(210 letters)
>mm_chr12_57824436_57825045
Length = 610
Score = 368 bits (190), Expect = e-106
Identities = 201/208 (96%), Gaps = 6/208 (2%)
Strand = Plus / Plus
Query: 1 acagtgtcaactgcttaacacagtcaggagagcatttaattatgtaaaaaaaatactcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgtcaactgcttaacacagtcaggagagcatttaattatgtaaaaaaaatactcat 260
Query: 61 gtggttgtagagtctatcactaaattctttcttctttttaaaatttgtctgttttgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggttgtagagtctatcactaaattctttcttctttttaaaatttgtctgttttgattt 320
Query: 121 tctgttgtttgtttgtgtttcactattttgagagagagggggcaggggcagggacaggga 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tctgttgtttgtttgtgtttcactattttgagagagagggggcaggg------acaggga 374
Query: 181 gagggagtgggagagggagtgggagagg 208
|||||||||||||| |||||||||||||
Sbjct: 375 gagggagtgggagatggagtgggagagg 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
