XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TAAATTCTTACTCCATATCCACAGGTAAGTGTGGCTCCCACGCTTCAGCA
AAGAATTTGCAGCAGCAGGAGACTATCCGAGATACACTGCCAGGCAGTGA
CCCTCCTCATCCAGACTCTTAGGAAAATTTCTTTTTCCTCAGTCAATCTA
TAGAGCTCATCTTTATGGAAGGTGTTACATGTACATTACAAAGGGTTTCA
GTGTAGTCACATTGGATTTGTTCTTATTTGGTTCCTCAGAGAGATTTAGG
TATGCTTAGTTGAGCCCCTGGGACTGAAATAATGATAAAAAGAATCATTT
TCATCAGACCATGCTGTGTCAAATAAACCAGTTGGCTGTTACATTGCTAA
CGTGTGAATCAACACCACCCATTGAGCCAATCCAGTTGCACTGAGCTACT
CTCTTGCATGAAGGGCCCATTACTCTGCTGCCCGTTCTGGAGGTCACAGA
GAACCCACAAATGACCATGCGATAGTACCCAGTAGGATAGTATGGCAACC
CAATTGGTAGATTGCATAAAAATTTAGACCAGTGTTTGTAGATGCACATA
GTAATTAATTATAAAGTCCCTGCTACCATATCTGATTTAGATAATTAATG
AAAAATAATAAATATAGTTTCAGAAAACCAAAATAAAGATAATAAATGAT
TGTTTTTTAGGAGCTATCAATAN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXGGTACTGACCTACATGCTTTACTCTTCCT
GGCTTGCTTTCATATGCCAGAAGCTGCTACCCATACTACAGGGAGAGAAA
AAGCCATCAACAGTTTTACCCAACCGTGAATCCTGAAAGCTACCATGTCA
ACCTACCTGGCAATATGCATCCATTGGTGCAACAGTGGCACAAATGTGAT
GGGAGTAACCAACTGCTTGCTGATTAGATTCAAGGCCCATTCCAGAAGAC
CCAACTTATGCCAGACCCAAGACCCTGTATCTCTGTAAGTTACAGTCCCT
AAGAGTGGGTCTTCTATTATTCTCTTTTATCAACATAATATTAAACTACC
CACTACGNCCCCACACCCTTAGCCAAGCTCTCCACACCCTTCAGAGAAGC
TTCTTTTTGTATTAGTAATATAGATATTCAAAGCTAATGAAAGTATAGAG
AAGAAGAGCTTGTAGACTGCTCAACCCTAAGTGTGACATCATCTATATCC
AACCTCCTCCCCACAAGGCTCAGGGATCATCTGATCCTAAGGGGGAATGA
GAAGATTGTAAGAGCCTGAGACTGTTGAGGACTACTGCTCCCAGACAACC
TTCTCTGGAGATTGCAGGGCCATTGATCACAGGAATATAGAGTGGCTGTA
TTTTCCTACATAAGACGTGCATGAAATCAGGGC

Query= MSMg01no319_h02.b1 MSMg01no319_h02.b1 CHROMAT_FILE:
MSMg01no319_h02.b1 PHD_FILE: MSMg01no319_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:47 2005
         (372 letters)



>mm_chr12_35250605_35251376
          Length = 772

 Score =  644 bits (333), Expect = 0.0
 Identities = 360/369 (97%), Gaps = 2/369 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaaattcttactccatatccacaggtaagtgtggctcccacgcttcagcaaaga 64
           ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattctaaattcctagtccatatccacaggtaagtgtggctcccatgcttcagcaaaga 264

                                                                       
Query: 65  atttgc-agcagcaggagactatccgagatacactgccaggcagtgaccctcctcatcca 123
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttgcca-cagcaggagactatccgagatacactgccaggcagtgaccctcctcatcca 323

                                                                       
Query: 124 gactcttaggaaaatttctttttcctcagtcaatctatagagctcatctttatggaaggt 183
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactcttaggaaaattactttttcctcagtcaatctatagagctcatctttatggaaggt 383

                                                                       
Query: 184 gttacatgtacattacaaagggtttcagtgtagtcacattggatttgttcttatttggtt 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 gttacatgtacattacaaagggtttcagtgtagtcacattggatttgttcttattttgtt 443

                                                                       
Query: 244 cctcagagagatttaggtatgcttagttgagcccctgggactgaaataatgataaaaaga 303
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctcagagagacttaggtatgcttagttgagcccctgggactgaaataatgataaaaaga 503

                                                                       
Query: 304 atcattttcatcagaccatgctgtgtcaaataaaccagttggctgttacattgctaacgt 363
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 atcattttcatcagaccatgctgtgttaaataaaccagttggctgttacattgctaacgt 563

                    
Query: 364 gtgaatcaa 372
           |||||||||
Sbjct: 564 gtgaatcaa 572


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space:   276969
Effective search space used:   276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)