Query= MSMg01no321_c13.b1 MSMg01no321_c13.b1 CHROMAT_FILE:
MSMg01no321_c13.b1 PHD_FILE: MSMg01no321_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:50 2005
(234 letters)
>mm_chr12_110635936_110636566
Length = 631
Score = 414 bits (214), Expect = e-120
Identities = 228/234 (97%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 1 ctggggggcagctgccatgctggctcccgcactgatgatggccctgccaagccttgttcc 60
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 201 ctggggggcagctgccatgctggctccctcactgatg---gccctgccaagccttgttcc 257
Query: 61 tgcttggcctccctgcaccaggctctactgaactgggaaggagtccccaaggtcaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgcttggcctccctgcaccaggctctactgaactgggaaggagtccccaaggtcaagaag 317
Query: 121 tacccaaggggcctacaccaaccccaggcaaatgacagactggaatttccatgcaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tacccaaggggcctacaccaaccccaggcaaatgacagactggaatttccatgcaagaag 377
Query: 181 ccaaactgagctgttcttcctgctacggtaaaatccaaagcctggaagccatca 234
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 378 ccaaactgagctgttcttcctgctacagtaaaatccaaagcctggaagtcatca 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 631
Length adjustment: 9
Effective length of query: 225
Effective length of database: 622
Effective search space: 139950
Effective search space used: 139950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_c13.g1 MSMg01no321_c13.g1 CHROMAT_FILE:
MSMg01no321_c13.g1 PHD_FILE: MSMg01no321_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:50 2005
(340 letters)
>mm_chr12_110796198_110796937
Length = 740
Score = 646 bits (334), Expect = 0.0
Identities = 337/338 (99%)
Strand = Plus / Minus
Query: 1 ttttgagacagagacaacactaggcggatggaggctcccatcttacaacacaagcaccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttttgagacagagacaacactaggcggatggaggctcccatcttacaacacaagcaccgg 479
Query: 61 gtcaaccctcgacttggctcactgggcaacaccccccacccccctgcccgcctccatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtcaaccctcgacttggctcactgggcaacaccccccacccccctgcccgcctccatctg 419
Query: 121 cacagactgcagctcgcctgacagggtacttggaacccccacccaatcagccattacgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cacagactgcagctcgcctgacagggtacttggaacccccacccaatcagccattacgta 359
Query: 181 tgctctctgtgctctagccacttacgatttacagttggagggtcctgggggcaggtgtct 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgctctctgttctctagccacttacgatttacagttggagggtcctgggggcaggtgtct 299
Query: 241 gtgtccgtgtgtccagggtcccacgcaggattccagatgatggctttggctaaaaatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtgtccgtgtgtccagggtcccacgcaggattccagatgatggctttggctaaaaatcag 239
Query: 301 aaagcttgcagtcacgggatagaatcccacccaggaaa 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaagcttgcagtcacgggatagaatcccacccaggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
