Query= MSMg01no326_f16.b1 MSMg01no326_f16.b1 CHROMAT_FILE:
MSMg01no326_f16.b1 PHD_FILE: MSMg01no326_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:03 2005
(252 letters)
>mm_chr12_35081693_35082344
Length = 652
Score = 480 bits (248), Expect = e-140
Identities = 251/252 (99%)
Strand = Plus / Minus
Query: 1 tgaacattctatgttcaccctttctataagcttattgaaagtaggcagatctttacatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgaacattctatgttcaccctttctataagcttattgaaagtaggcagatctttacatat 393
Query: 61 gtgttttcaagccaaggagtcagtaagagagacattcattgaattgctcacctctgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtgttttcaagccaaggagtcagtaagagagacattcattgaattgctcacctctgctct 333
Query: 121 atatcatcctcttttactagctctctttgtcctttgctcctccccttctgggtttcttgt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atatcatcctcttttactcgctctctttgtcctttgctcctccccttctgggtttcttgt 273
Query: 181 ctgcagggcagtcatgctctcctggggtttcgcctgcactttgtgtacactttctgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctgcagggcagtcatgctctcctggggtttcgcctgcactttgtgtacactttctgccct 213
Query: 241 gttacctgtgaa 252
||||||||||||
Sbjct: 212 gttacctgtgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no326_f16.g1 MSMg01no326_f16.g1 CHROMAT_FILE:
MSMg01no326_f16.g1 PHD_FILE: MSMg01no326_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:03 2005
(388 letters)
>mm_chr12_35012730_35013518
Length = 789
Score = 690 bits (357), Expect = 0.0
Identities = 381/389 (97%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 1 aggactttcagtacagaaataattagttttaaaagtaatatcatgagttaaagttctaag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aggactttcagtacagaaataattaattttaaaagtaatatcatgagttaaagttctaag 260
Query: 61 agaaatggaataagtggctattataaaaagccactaattacaacttttagttttgtctgt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatggaataagtggctattataaaaagccactaattacaacttttagttttgtctgt 320
Query: 121 tgatctaagaggtttgaggcagatagtagctcgtaatggatttttggaacaattgggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatctaagaggtttgaggcagatagtagctcgtaatggatttttggaacaattgggggt 380
Query: 181 ttggacatacagttgggtcaaaagagaagaattaatactcacatacctttcgattctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggacatacagttgggtcaaaagagaagaattaatactcacatacctttcgattctgag 440
Query: 241 aagtcatttgattgaacacaacttagacgactcacctatattttatcagtggtaaatgca 300
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcatttgattgaacacaacttagaggactcacctatattttatcagtggtaaatgca 500
Query: 301 actgatagaatttgtgtgcaagttaccaaacatgagaaactcaaaaaagaaa-gctactt 359
||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 501 actgataaaatttgtgtgcaagttaccaaacatgagaaactcaaaaaaaaaaagctactt 560
Query: 360 attactatttccactttctgacgcagtac 388
|||||||||||||||||||||| ||||||
Sbjct: 561 attactatttccactttctgacacagtac 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 789
Length adjustment: 9
Effective length of query: 379
Effective length of database: 780
Effective search space: 295620
Effective search space used: 295620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
