NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGACCGC
GGAATTCCCTCCTTATAAAAGATCATGGTCTTTTTTTTTTCTAAAGACTC
TGAACTGATTGATAAAGTCTATCCATAGCACAAAGAGTATGTTTGTTTAA
TACAGAGTTCAATATTCTAAATATCCACATCTACGTGGAACATTGACATC
ACTTCTACTGACATTGGACTAGTTGAGGACCAAGGTACCCTTAATTTGGC
AGCAAGATAGACCACTCTACTTATGTGAGCATCAGACCTAACATGACAGA
TGGTAATACTGAGAAAATCAAACTTAAGGAGTGTTAGTTATGTTGACTCC
ATATGGTGTGCGTGAAGGATAATAGATATCAGATGAGATATTCATATAAA
GGATGCTGCCTGTGTCTTACGCCATTTAGCCTTCTACTGTTAAGATGTGG
AACAATACTCTGCTTTGAGATTTTTAAGCTTCCCCCTTTAATTTTTTTAT
TTAATCTTTTTTTCTTTCTATACTTCAGATTTTATCCCCCTCCAGGTCCA
ACCTCTGTTCCACATCCCATACCTCCTCCCTCCCTTCCATCTCCATGAGG
ATGACCCCACCCCCACACCACTAGACCTCCCCATTCCCTGAGGCCTCCAG
TCTCTTGAGTCTTAGGTGCATCATTTCTGACTGAGTCCAGACCTGGTGGT
CCTCTGCTCTATAG

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGTACCTGTAAAAATGTTCAACACCCTTAATCACCAGGGAAATGGAA
ATCAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATACTGATGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCTGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCATAATATTGGACATAGTACTACCGGAGGATCC
AGCAATACCATTCCTGGAAATATATCCTGAAGATGTCCCAACTGGTAAGA
AGGACACATGCTCCACTATGCCCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATTTACTCAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTAGGATATTCCTAGCCAAATGGATGGACCTGGAGGGCGTCATCCTGAGT
GATGCTACACATTCACATAGGAACTCACACAATATGTATTCACTGATAAG
TGGATATTAGCCCAACCCCCAGGATACCCTCGATATATTATACACTTTGC
TCACCACATGAAACT

Query= MSMg01no327_n11.b1 MSMg01no327_n11.b1 CHROMAT_FILE:
MSMg01no327_n11.b1 PHD_FILE: MSMg01no327_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:49 2005
         (666 letters)



>mm_chr12_97562168_97563231
          Length = 1064

 Score = 1096 bits (567), Expect = 0.0
 Identities = 637/665 (95%), Gaps = 13/665 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattccctccttat-aaaagatcatggtcttttttttttctaaagactctgaactgatt 62
           ||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||
Sbjct: 206 gaattccctccttataaaaagatcatggtc---tttttttctaaagactctgaactgatt 262

                                                                       
Query: 63  gataaagtctatccatagcacaaagagtatgtttgtttaatacagagttcaatattctaa 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 263 gataaagtctatccatagcacaaagagtatgtttgtttaatacagagttcattattctaa 322

                                                                       
Query: 123 atatccacatctacgtggaacattgacatcacttctactgacattggactagttgaggac 182
           |||||||||||||||||||||||||||||||||||||||||||||||||||   || |||
Sbjct: 323 atatccacatctacgtggaacattgacatcacttctactgacattggacta---gatgac 379

                                                                       
Query: 183 caaggtacccttaatttggcagcaagatagaccactctacttatgtgagcatcagaccta 242
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaggtaccattaatttggcagcaagatagaccactctacttatgtgagcatcagaccta 439

                                                                       
Query: 243 acatgacagatggtaatactgagaaaatcaaacttaaggagtgttagttatgttgactcc 302
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acataacagatggtaatactgagaaaatcaaacttaaggagtgttagttatgttgactcc 499

                                                                       
Query: 303 atatggtgtgcgtgaaggataatagatatcagatgagatattcatataaaggatgctgcc 362
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 500 atatggtgtgtgtgaaggataatagatatcagatgagatattcatataaaggatactgcc 559

                                                                       
Query: 363 tgtgtcttacgccatttagccttctactgttaagatgtggaacaatactctgctttgaga 422
           ||||||||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 tgtgtcttatgttattcagccttctactgttaagatgtagaacaatactctgctttgaga 619

                                                                       
Query: 423 tttttaagcttccccctttaattttttt--atttaatctttttttctttctatacttcag 480
           |||| |||||||||||||||||||||||  |||||||||||||||   ||||||||||||
Sbjct: 620 tttt-aagcttccccctttaatttttttttatttaatcttttttt---tctatacttcag 675

                                                                       
Query: 481 attttatccccctccaggtccaacctctgttccacatcccatacctcctccctcccttcc 540
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gttttatccccctccaggtccaacctctgttccacatcccatacctcctccctcccttcc 735

                                                                       
Query: 541 atctccatgaggatgaccccacccccacaccactagacctccccattccctgaggcctcc 600
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 atctccatgaggatgaccctacccccacaccactagacctccccattccctgaggcctcc 795

                                                                       
Query: 601 agtctcttgagtcttaggtgcatcatttctgactgagtccagacctggtggtcctctgct 660
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 796 agtctcttgagtcttaggtgcatcatttctgactgagtccagacctggcggtcctctgct 855

                
Query: 661 ctata 665
            ||||
Sbjct: 856 gtata 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1064
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1054
Effective search space:   691424
Effective search space used:   691424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)