Query= MSMg01no328_d20.b1 MSMg01no328_d20.b1 CHROMAT_FILE:
MSMg01no328_d20.b1 PHD_FILE: MSMg01no328_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:20 2005
(380 letters)
>mm_chr12_45576303_45577081
Length = 779
Score = 687 bits (355), Expect = 0.0
Identities = 370/375 (98%), Gaps = 1/375 (0%)
Strand = Plus / Plus
Query: 6 ggaattcagctaactccccacgttctgccagcagggggatggttttatgactttctatta 65
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcaggtaactcccca-gttctgccagcagggggatggttttatgactttctattg 264
Query: 66 ttgaaatgcagaggtggagttggaaaaccatctaaagaaatgtccctttcatgtttgaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgaaatgcagaggtggagttggaaaaccatctaaagaaatgtccctttcatgtttgaag 324
Query: 126 gaaatgaacaaatctagcatttgtttttcagggaacaaatgctcttccaaaagaacagaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaatgaacaaatctagcatttgtttttcagggaacaaatgctcttccaaaagaacagaa 384
Query: 186 actgttcccaaatctttgaagtatttcattaattcattaacaagaaactggggaagtgtc 245
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 actgttcccaaatctttgaagtatgtcattaattcattaacaagaaactggggaagtgtc 444
Query: 246 ccagtgacaaacatgggctttgtcaggctaaaggctgatcatgagttgtaagagctgctt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagtgacaaacatgggctttgtcaggctaaaggctgatcatgagttgtaagagctgctt 504
Query: 306 gggcgcttgtcttatgataccatcaggctctcaatgggcacagccatgtatttaaagtta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 gggcgcttgtcttatgataccatcaggctctcaatgggcacagccatgtattttaagtta 564
Query: 366 aaagccttgtcctca 380
|||||||||||||||
Sbjct: 565 aaagccttgtcctca 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 779
Length adjustment: 9
Effective length of query: 371
Effective length of database: 770
Effective search space: 285670
Effective search space used: 285670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_d20.g1 MSMg01no328_d20.g1 CHROMAT_FILE:
MSMg01no328_d20.g1 PHD_FILE: MSMg01no328_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:20 2005
(250 letters)
>mm_chr12_45609916_45610565
Length = 650
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 attagtaagtgacagtaagaacgtaaaagctgtgtttgcctagacatcatataaatgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attagtaagtgacagtaagaacgtaaaagctgtgtttgcctagacatcatataaatgtgc 390
Query: 61 agagatgcctgacacaggtgctaagagaaacacgaagtttctaaatatgtgtaaaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agagatgcctgacacaggtgctaagagaaacacgaagtttctaaatatgtgtaaaacaca 330
Query: 121 tagttgtttgtgggtgaccatgtaccataatccctgccacacaaaagtggggtgaggggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tagttgtttgtgggtgaccatgtaccataatccctgccacacaaaagtggggtgaggggg 270
Query: 181 aagtgaagacagtgagatccatctttcatacaacactgcataaccaggccagctagagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aagtgaagacagtgagatccatctttcatacaacactgcataaccaggccagctagagag 210
Query: 241 tggtcctga 249
|||||||||
Sbjct: 209 tggtcctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
