Query= MSMg01no329_e07.b1 MSMg01no329_e07.b1 CHROMAT_FILE:
MSMg01no329_e07.b1 PHD_FILE: MSMg01no329_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:39 2005
(524 letters)
>mm_chr12_34906565_34907487
Length = 923
Score = 982 bits (508), Expect = 0.0
Identities = 517/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Plus
Query: 5 gaattccagagctgaacacgcagtcagatatatccatgatcaagaaatgccttaaccccc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagagctgaaca-gcagtcagatatatccatgatcaagaaatgccttaaccccc 263
Query: 65 aggttagtgggcatgcatcacagtgagctgacgagactccagcacaaaggcagggagcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggttagtgggcatgcatcacagtgagctgacgagactccagcacaaaggcagggagcta 323
Query: 125 taaatccttgaaggctgcgcgctcaggaacgatgggttgtctgatgtgaaaaaataatcg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaatccttgaaggctgcgcgctcaggaacgatgggttgtctgatgtgaaaaaataatcg 383
Query: 185 tttatcacacagttcacaacacttttcactttagtatgatttggggacatgctcaaaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttatcacacagttcacaacacttttcactttagtatgatttggggacatgctcaaaaat 443
Query: 245 gaatgcttccttaacacacaatccataaatttataaaataattttattatacctcaagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaatgcttccttaacacacaatccataaatttataaaataattttattatacctcaagaa 503
Query: 305 tatttccttctaaatctttacctgaaatcataaaggtatcaaaaagtcattcttccttga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatttccttctaaatctttacctgaaatcataaaggtatcaaaaagtcattcttccttga 563
Query: 365 tcttcttgcgcacagctaatctttgttataatcatttatatccaatgggtaaatttagta 424
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcttcttgcgtacagttaatctttgttataatcatttatatccaatgggtaaatttagta 623
Query: 425 tatgttttggtaagcttacataataatcacttaatgacaaattagaagttggtatagttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatgttttggtaagcttacataataatcacttaatgacaaattagaagttggtatagttt 683
Query: 485 aaatgtatcttcctgtgcatgggaaatgtcatccttagga 524
||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaatgtatcttcctgtgcatgggaaatgtcatccttagga 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_e07.g1 MSMg01no329_e07.g1 CHROMAT_FILE:
MSMg01no329_e07.g1 PHD_FILE: MSMg01no329_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:39 2005
(424 letters)
>mm_chr12_34964280_34965103
Length = 824
Score = 766 bits (396), Expect = 0.0
Identities = 417/424 (98%)
Strand = Plus / Minus
Query: 1 taggtcctttggatttcaatgagcctatattttcatctccatccaagcaagcccaaacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 624 taggtcctttggatttcaatgagcctatattttcatctccatccaagcaaacccaaacac 565
Query: 61 agcatatacagaagacaggcagtatgaatttggagtagctcagtttagcattatggatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcatatacagaagacaggcagtatgaatttggagtagctcagtttagcattatggatgc 505
Query: 121 accgtggaggtttgaaatcacttggtaattgtttttgtcttaaaaaaaagactcctctgg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 accgtggaggtttggaatcacttggtaattgtttttgtcttaaaaaaaagactcctctgg 445
Query: 181 ttcaaattacctaagatgatggccaatccataatgaaaattgtcattgctttgaatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcaaattacctaagatgatggccaatccataatgaaaattgtcattgctttgaatacac 385
Query: 241 agcttcattgtctctaggtttaatgtgtagctactgaatgctgatggattaattggcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcttcattgtctctaggtttaatgtgtagctactgaatgctgatggattaattggcttt 325
Query: 301 tgaggagatgacctcggacattatgaaatcagaaagtctctgctccccaccagagcttcc 360
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 324 tgaggagatgacctcggacattatgaaatcagaaagtctctgcttcttattagagcttcc 265
Query: 361 tctagaattgcttgtggtaattggagtcgtggtcagccagctcatggcaagcagcactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctagaattgcttgtggtaattggagtcgtggtcagccagctcatggcaagcagcactga 205
Query: 421 ggac 424
||||
Sbjct: 204 ggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
